Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl3P10855 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl3P10855 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ccl3P10855 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl3P10855 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl3P10855 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl3P10855 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ccl3P10855 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccl3P10855 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl3P10855 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl3P10855 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl3P10855 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl3P10855 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl3P10855 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl3P10855 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl3P10855 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ccl3P10855 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.21□□□□□ -0.13
Ccl3P10855 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.21□□□□□ -0.13
Ccl3P10855 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl3P10855 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.21□□□□□ -0.13
Ccl3P10855 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl3P10855 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.21□□□□□ -0.13
Ccl3P10855 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.21□□□□□ -0.13
Ccl3P10855 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Ccl3P10855 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ccl3P10855 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.21□□□□□ -0.13
Ccl3P10855 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl3P10855 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl3P10855 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl3P10855 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl3P10855 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl3P10855 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl3P10855 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl3P10855 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ccl3P10855 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl3P10855 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl3P10855 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccl3P10855 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ccl3P10855 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ccl3P10855 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccl3P10855 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ccl3P10855 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ccl3P10855 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccl3P10855 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ccl3P10855 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl3P10855 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Ccl3P10855 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl3P10855 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccl3P10855 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl3P10855 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ccl3P10855 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl3P10855 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl3P10855 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccl3P10855 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl3P10855 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Ccl3P10855 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccl3P10855 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Ccl3P10855 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.2□□□□□ -0.14
Ccl3P10855 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl3P10855 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl3P10855 Gm45167-201ENSMUST00000208007 322 ntBASIC14.2□□□□□ -0.14
Ccl3P10855 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ccl3P10855 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl3P10855 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ccl3P10855 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl3P10855 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl3P10855 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ccl3P10855 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl3P10855 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ccl3P10855 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl3P10855 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl3P10855 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ccl3P10855 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl3P10855 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl3P10855 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl3P10855 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ccl3P10855 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl3P10855 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccl3P10855 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccl3P10855 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.19□□□□□ -0.14
Ccl3P10855 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl3P10855 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccl3P10855 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl3P10855 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl3P10855 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.19□□□□□ -0.14
Ccl3P10855 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.19□□□□□ -0.14
Ccl3P10855 Gm37153-201ENSMUST00000193637 231 ntBASIC14.19□□□□□ -0.14
Ccl3P10855 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl3P10855 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl3P10855 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl3P10855 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.19□□□□□ -0.14
Ccl3P10855 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl3P10855 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl3P10855 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.19□□□□□ -0.14
Ccl3P10855 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl3P10855 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ccl3P10855 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ccl3P10855 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl3P10855 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ccl3P10855 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms