Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc6P10629 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc6P10629 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.85■□□□□ 0.45
Hoxc6P10629 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.85■□□□□ 0.45
Hoxc6P10629 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc6P10629 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
Hoxc6P10629 Gm10576-201ENSMUST00000191927 825 ntBASIC17.85■□□□□ 0.45
Hoxc6P10629 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc6P10629 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc6P10629 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.85■□□□□ 0.45
Hoxc6P10629 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc6P10629 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc6P10629 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc6P10629 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc6P10629 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Hoxc6P10629 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Hoxc6P10629 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc6P10629 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc6P10629 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hoxc6P10629 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc6P10629 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc6P10629 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc6P10629 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc6P10629 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc6P10629 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc6P10629 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc6P10629 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.84■□□□□ 0.45
Hoxc6P10629 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.84■□□□□ 0.45
Hoxc6P10629 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.84■□□□□ 0.45
Hoxc6P10629 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc6P10629 Gm7063-201ENSMUST00000186840 981 ntBASIC17.84■□□□□ 0.45
Hoxc6P10629 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc6P10629 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc6P10629 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc6P10629 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hoxc6P10629 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hoxc6P10629 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hoxc6P10629 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hoxc6P10629 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Hoxc6P10629 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Hoxc6P10629 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hoxc6P10629 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.83■□□□□ 0.45
Hoxc6P10629 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hoxc6P10629 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hoxc6P10629 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hoxc6P10629 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc6P10629 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.83■□□□□ 0.44
Hoxc6P10629 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc6P10629 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc6P10629 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Hoxc6P10629 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.83■□□□□ 0.44
Hoxc6P10629 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc6P10629 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc6P10629 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc6P10629 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc6P10629 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Hoxc6P10629 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.83■□□□□ 0.44
Hoxc6P10629 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc6P10629 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc6P10629 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc6P10629 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc6P10629 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc6P10629 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc6P10629 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc6P10629 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc6P10629 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hoxc6P10629 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc6P10629 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc6P10629 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc6P10629 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc6P10629 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Hoxc6P10629 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc6P10629 Gm37153-201ENSMUST00000193637 231 ntBASIC17.82■□□□□ 0.44
Hoxc6P10629 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.82■□□□□ 0.44
Hoxc6P10629 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.82■□□□□ 0.44
Hoxc6P10629 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.82■□□□□ 0.44
Hoxc6P10629 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc6P10629 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc6P10629 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.82■□□□□ 0.44
Hoxc6P10629 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc6P10629 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hoxc6P10629 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Hoxc6P10629 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.81■□□□□ 0.44
Hoxc6P10629 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc6P10629 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Hoxc6P10629 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc6P10629 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc6P10629 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc6P10629 Gm27300-201ENSMUST00000184085 97 ntBASIC17.81■□□□□ 0.44
Hoxc6P10629 Gm27335-201ENSMUST00000184758 97 ntBASIC17.81■□□□□ 0.44
Hoxc6P10629 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Hoxc6P10629 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.81■□□□□ 0.44
Hoxc6P10629 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc6P10629 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.81■□□□□ 0.44
Hoxc6P10629 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Hoxc6P10629 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc6P10629 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc6P10629 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc6P10629 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hoxc6P10629 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms