Protein–RNA interactions for Protein: P0DP28

Calm3, Calmodulin-3, mousemouse

Known RBP Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calm3P0DP28 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Calm3P0DP28 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.58■□□□□ 0.57
Calm3P0DP28 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Calm3P0DP28 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.58■□□□□ 0.57
Calm3P0DP28 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Calm3P0DP28 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Calm3P0DP28 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Calm3P0DP28 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Calm3P0DP28 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Calm3P0DP28 Gm15165-201ENSMUST00000118140 502 ntBASIC18.58■□□□□ 0.56
Calm3P0DP28 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.58■□□□□ 0.56
Calm3P0DP28 Gm28033-201ENSMUST00000184224 96 ntBASIC18.58■□□□□ 0.56
Calm3P0DP28 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.58■□□□□ 0.56
Calm3P0DP28 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.58■□□□□ 0.56
Calm3P0DP28 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.58■□□□□ 0.56
Calm3P0DP28 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Calm3P0DP28 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Calm3P0DP28 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Calm3P0DP28 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Calm3P0DP28 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Calm3P0DP28 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Calm3P0DP28 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Calm3P0DP28 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Calm3P0DP28 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Calm3P0DP28 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Calm3P0DP28 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Calm3P0DP28 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Calm3P0DP28 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Calm3P0DP28 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Calm3P0DP28 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Calm3P0DP28 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Calm3P0DP28 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Calm3P0DP28 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Calm3P0DP28 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Calm3P0DP28 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.57■□□□□ 0.56
Calm3P0DP28 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Calm3P0DP28 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.57■□□□□ 0.56
Calm3P0DP28 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Calm3P0DP28 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.57■□□□□ 0.56
Calm3P0DP28 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.57■□□□□ 0.56
Calm3P0DP28 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Calm3P0DP28 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Calm3P0DP28 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Calm3P0DP28 Gm10819-201ENSMUST00000099988 561 ntBASIC18.57■□□□□ 0.56
Calm3P0DP28 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Calm3P0DP28 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Calm3P0DP28 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Calm3P0DP28 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Calm3P0DP28 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Calm3P0DP28 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Calm3P0DP28 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.57■□□□□ 0.56
Calm3P0DP28 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.57■□□□□ 0.56
Calm3P0DP28 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Calm3P0DP28 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Calm3P0DP28 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Calm3P0DP28 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Calm3P0DP28 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Calm3P0DP28 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Calm3P0DP28 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.56■□□□□ 0.56
Calm3P0DP28 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Calm3P0DP28 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Calm3P0DP28 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Calm3P0DP28 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Calm3P0DP28 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Calm3P0DP28 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Calm3P0DP28 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Calm3P0DP28 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
Calm3P0DP28 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Calm3P0DP28 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Calm3P0DP28 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Calm3P0DP28 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Calm3P0DP28 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.55■□□□□ 0.56
Calm3P0DP28 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.55■□□□□ 0.56
Calm3P0DP28 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.55■□□□□ 0.56
Calm3P0DP28 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Calm3P0DP28 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Calm3P0DP28 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Calm3P0DP28 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Calm3P0DP28 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Calm3P0DP28 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Calm3P0DP28 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Calm3P0DP28 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Calm3P0DP28 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Calm3P0DP28 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Calm3P0DP28 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Calm3P0DP28 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.54■□□□□ 0.56
Calm3P0DP28 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Calm3P0DP28 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Calm3P0DP28 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Calm3P0DP28 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.54■□□□□ 0.56
Calm3P0DP28 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Calm3P0DP28 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Calm3P0DP28 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Calm3P0DP28 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.54■□□□□ 0.56
Calm3P0DP28 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.54■□□□□ 0.56
Calm3P0DP28 Gm25406-201ENSMUST00000157599 105 ntBASIC18.54■□□□□ 0.56
Calm3P0DP28 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.54■□□□□ 0.56
Calm3P0DP28 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Calm3P0DP28 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Calm3P0DP28 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms