Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxc9P09633 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxc9P09633 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Hoxc9P09633 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxc9P09633 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxc9P09633 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxc9P09633 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC20.85■□□□□ 0.93
Hoxc9P09633 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Hoxc9P09633 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc9P09633 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc9P09633 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc9P09633 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc9P09633 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc9P09633 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc9P09633 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc9P09633 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc9P09633 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Hoxc9P09633 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc9P09633 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc9P09633 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Hoxc9P09633 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc9P09633 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc9P09633 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Hoxc9P09633 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc9P09633 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc9P09633 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc9P09633 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Hoxc9P09633 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc9P09633 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC20.84■□□□□ 0.93
Hoxc9P09633 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc9P09633 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxc9P09633 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxc9P09633 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxc9P09633 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
Hoxc9P09633 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxc9P09633 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxc9P09633 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxc9P09633 Gm15500-202ENSMUST00000071641 1019 ntBASIC20.83■□□□□ 0.93
Hoxc9P09633 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Hoxc9P09633 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC20.83■□□□□ 0.93
Hoxc9P09633 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Hoxc9P09633 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hoxc9P09633 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hoxc9P09633 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hoxc9P09633 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hoxc9P09633 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC20.83■□□□□ 0.92
Hoxc9P09633 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hoxc9P09633 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hoxc9P09633 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hoxc9P09633 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.82■□□□□ 0.92
Hoxc9P09633 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxc9P09633 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC20.82■□□□□ 0.92
Hoxc9P09633 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxc9P09633 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxc9P09633 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxc9P09633 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxc9P09633 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC20.82■□□□□ 0.92
Hoxc9P09633 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC20.82■□□□□ 0.92
Hoxc9P09633 AC159295.1-201ENSMUST00000225326 940 ntBASIC20.82■□□□□ 0.92
Hoxc9P09633 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxc9P09633 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxc9P09633 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Hoxc9P09633 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Hoxc9P09633 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxc9P09633 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxc9P09633 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxc9P09633 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxc9P09633 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxc9P09633 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.82■□□□□ 0.92
Hoxc9P09633 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxc9P09633 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxc9P09633 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Hoxc9P09633 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxc9P09633 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxc9P09633 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxc9P09633 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxc9P09633 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxc9P09633 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Hoxc9P09633 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxc9P09633 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Hoxc9P09633 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxc9P09633 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxc9P09633 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxc9P09633 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxc9P09633 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxc9P09633 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Hoxc9P09633 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxc9P09633 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxc9P09633 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.8■□□□□ 0.92
Hoxc9P09633 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxc9P09633 Gm26308-201ENSMUST00000157768 69 ntBASIC20.8■□□□□ 0.92
Hoxc9P09633 Gm6257-201ENSMUST00000163864 910 ntBASIC20.8■□□□□ 0.92
Hoxc9P09633 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC20.8■□□□□ 0.92
Hoxc9P09633 Chchd1-203ENSMUST00000224633 557 ntBASIC20.8■□□□□ 0.92
Hoxc9P09633 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxc9P09633 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxc9P09633 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxc9P09633 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxc9P09633 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxc9P09633 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms