Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxa9P09631 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxa9P09631 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxa9P09631 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hoxa9P09631 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxa9P09631 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxa9P09631 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.18■□□□□ 0.18
Hoxa9P09631 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxa9P09631 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxa9P09631 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxa9P09631 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Hoxa9P09631 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Hoxa9P09631 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxa9P09631 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxa9P09631 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxa9P09631 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.18■□□□□ 0.18
Hoxa9P09631 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.18■□□□□ 0.18
Hoxa9P09631 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.18■□□□□ 0.18
Hoxa9P09631 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Hoxa9P09631 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxa9P09631 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxa9P09631 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxa9P09631 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Hoxa9P09631 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.18■□□□□ 0.18
Hoxa9P09631 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxa9P09631 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.18■□□□□ 0.18
Hoxa9P09631 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa9P09631 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa9P09631 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa9P09631 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa9P09631 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa9P09631 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.17■□□□□ 0.18
Hoxa9P09631 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.17■□□□□ 0.18
Hoxa9P09631 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa9P09631 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa9P09631 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa9P09631 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa9P09631 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa9P09631 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Hoxa9P09631 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.17■□□□□ 0.18
Hoxa9P09631 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.17■□□□□ 0.18
Hoxa9P09631 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa9P09631 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.17■□□□□ 0.18
Hoxa9P09631 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.17■□□□□ 0.18
Hoxa9P09631 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.17■□□□□ 0.18
Hoxa9P09631 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
Hoxa9P09631 Gm8655-201ENSMUST00000221159 852 ntBASIC16.17■□□□□ 0.18
Hoxa9P09631 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa9P09631 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa9P09631 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa9P09631 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa9P09631 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.17■□□□□ 0.18
Hoxa9P09631 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa9P09631 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Hoxa9P09631 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa9P09631 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa9P09631 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxa9P09631 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxa9P09631 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxa9P09631 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Hoxa9P09631 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxa9P09631 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxa9P09631 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxa9P09631 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxa9P09631 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxa9P09631 Gm4459-201ENSMUST00000118750 468 ntBASIC16.16■□□□□ 0.18
Hoxa9P09631 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.16■□□□□ 0.18
Hoxa9P09631 Gm5364-201ENSMUST00000216789 889 ntBASIC16.16■□□□□ 0.18
Hoxa9P09631 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.16■□□□□ 0.18
Hoxa9P09631 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Hoxa9P09631 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxa9P09631 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxa9P09631 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxa9P09631 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxa9P09631 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxa9P09631 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxa9P09631 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Hoxa9P09631 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Hoxa9P09631 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxa9P09631 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxa9P09631 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Hoxa9P09631 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Hoxa9P09631 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.15■□□□□ 0.18
Hoxa9P09631 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxa9P09631 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.15■□□□□ 0.18
Hoxa9P09631 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.15■□□□□ 0.18
Hoxa9P09631 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxa9P09631 Gm25406-201ENSMUST00000157599 105 ntBASIC16.15■□□□□ 0.18
Hoxa9P09631 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.15■□□□□ 0.18
Hoxa9P09631 Gm6089-201ENSMUST00000197666 938 ntBASIC16.15■□□□□ 0.18
Hoxa9P09631 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxa9P09631 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.15■□□□□ 0.18
Hoxa9P09631 AV026068-213ENSMUST00000223675 1171 ntBASIC16.15■□□□□ 0.18
Hoxa9P09631 Psmb5-202ENSMUST00000227257 622 ntBASIC16.15■□□□□ 0.18
Hoxa9P09631 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxa9P09631 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxa9P09631 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxa9P09631 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxa9P09631 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxa9P09631 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms