Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
NefmP08553 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NefmP08553 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
NefmP08553 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
NefmP08553 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
NefmP08553 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC23.86■■□□□ 1.41
NefmP08553 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
NefmP08553 Gm29994-201ENSMUST00000195495 1193 ntBASIC23.86■■□□□ 1.41
NefmP08553 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NefmP08553 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
NefmP08553 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NefmP08553 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
NefmP08553 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC23.86■■□□□ 1.41
NefmP08553 Gm45212-201ENSMUST00000205831 3403 ntBASIC23.85■■□□□ 1.41
NefmP08553 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NefmP08553 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NefmP08553 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
NefmP08553 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NefmP08553 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
NefmP08553 Gm13474-201ENSMUST00000122466 815 ntBASIC23.85■■□□□ 1.41
NefmP08553 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC23.85■■□□□ 1.41
NefmP08553 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NefmP08553 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NefmP08553 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NefmP08553 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NefmP08553 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC23.85■■□□□ 1.41
NefmP08553 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
NefmP08553 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NefmP08553 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
NefmP08553 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NefmP08553 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
NefmP08553 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NefmP08553 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NefmP08553 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
NefmP08553 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NefmP08553 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
NefmP08553 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NefmP08553 Gm38327-201ENSMUST00000195852 1755 ntBASIC23.83■■□□□ 1.41
NefmP08553 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NefmP08553 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NefmP08553 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
NefmP08553 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC23.83■■□□□ 1.41
NefmP08553 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
NefmP08553 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC23.83■■□□□ 1.41
NefmP08553 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NefmP08553 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
NefmP08553 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NefmP08553 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NefmP08553 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC23.83■■□□□ 1.41
NefmP08553 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NefmP08553 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NefmP08553 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
NefmP08553 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NefmP08553 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
NefmP08553 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NefmP08553 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NefmP08553 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
NefmP08553 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
NefmP08553 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC23.83■■□□□ 1.4
NefmP08553 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
NefmP08553 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.4
NefmP08553 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NefmP08553 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NefmP08553 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NefmP08553 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
NefmP08553 Gm16061-201ENSMUST00000122167 857 ntBASIC23.82■■□□□ 1.4
NefmP08553 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NefmP08553 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NefmP08553 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NefmP08553 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
NefmP08553 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NefmP08553 Gm5421-201ENSMUST00000181698 2354 ntBASIC23.82■■□□□ 1.4
NefmP08553 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
NefmP08553 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NefmP08553 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
NefmP08553 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NefmP08553 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NefmP08553 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NefmP08553 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NefmP08553 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NefmP08553 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
NefmP08553 Gm3272-201ENSMUST00000181181 1229 ntBASIC23.81■■□□□ 1.4
NefmP08553 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC23.81■■□□□ 1.4
NefmP08553 Gm10566-201ENSMUST00000086739 996 ntBASIC23.81■■□□□ 1.4
NefmP08553 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NefmP08553 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
NefmP08553 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
NefmP08553 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NefmP08553 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NefmP08553 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
NefmP08553 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NefmP08553 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC23.8■■□□□ 1.4
NefmP08553 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
NefmP08553 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NefmP08553 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NefmP08553 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NefmP08553 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
NefmP08553 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NefmP08553 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
NefmP08553 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC23.8■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms