Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sod1P08228 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Sod1P08228 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sod1P08228 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sod1P08228 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.11■□□□□ 0.01
Sod1P08228 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sod1P08228 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.11■□□□□ 0.01
Sod1P08228 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.11■□□□□ 0.01
Sod1P08228 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sod1P08228 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sod1P08228 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sod1P08228 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sod1P08228 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sod1P08228 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sod1P08228 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sod1P08228 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sod1P08228 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sod1P08228 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Sod1P08228 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.1■□□□□ 0.01
Sod1P08228 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sod1P08228 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.1■□□□□ 0.01
Sod1P08228 Gm6257-201ENSMUST00000163864 910 ntBASIC15.1■□□□□ 0.01
Sod1P08228 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sod1P08228 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.1■□□□□ 0.01
Sod1P08228 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.1■□□□□ 0.01
Sod1P08228 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sod1P08228 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Sod1P08228 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sod1P08228 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.1■□□□□ 0.01
Sod1P08228 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sod1P08228 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sod1P08228 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sod1P08228 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sod1P08228 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Sod1P08228 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
Sod1P08228 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sod1P08228 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sod1P08228 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sod1P08228 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sod1P08228 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sod1P08228 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sod1P08228 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sod1P08228 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.1■□□□□ 0.01
Sod1P08228 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sod1P08228 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.09■□□□□ 0.01
Sod1P08228 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.09■□□□□ 0.01
Sod1P08228 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sod1P08228 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Sod1P08228 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Sod1P08228 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sod1P08228 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sod1P08228 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sod1P08228 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sod1P08228 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sod1P08228 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.09■□□□□ 0.01
Sod1P08228 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.09■□□□□ 0.01
Sod1P08228 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sod1P08228 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Sod1P08228 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.09■□□□□ 0.01
Sod1P08228 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sod1P08228 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sod1P08228 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.09■□□□□ 0.01
Sod1P08228 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sod1P08228 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sod1P08228 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sod1P08228 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sod1P08228 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sod1P08228 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sod1P08228 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Sod1P08228 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sod1P08228 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.09■□□□□ 0.01
Sod1P08228 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sod1P08228 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.08■□□□□ 0.01
Sod1P08228 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sod1P08228 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Sod1P08228 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.08■□□□□ 0
Sod1P08228 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sod1P08228 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.08■□□□□ 0
Sod1P08228 Gm26308-201ENSMUST00000157768 69 ntBASIC15.08■□□□□ 0
Sod1P08228 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.08■□□□□ 0
Sod1P08228 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sod1P08228 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Sod1P08228 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.08■□□□□ 0
Sod1P08228 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sod1P08228 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sod1P08228 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sod1P08228 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sod1P08228 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sod1P08228 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.08■□□□□ 0
Sod1P08228 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Sod1P08228 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.08■□□□□ 0
Sod1P08228 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Sod1P08228 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sod1P08228 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sod1P08228 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.08■□□□□ 0
Sod1P08228 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Sod1P08228 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sod1P08228 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sod1P08228 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Sod1P08228 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms