Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.2□□□□□ -0.14
P04224 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04224 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.2□□□□□ -0.14
P04224 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.2□□□□□ -0.14
P04224 Gm10602-201ENSMUST00000098239 609 ntBASIC14.2□□□□□ -0.14
P04224 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04224 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
P04224 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04224 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04224 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04224 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
P04224 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04224 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04224 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04224 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04224 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
P04224 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04224 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04224 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04224 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04224 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
P04224 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04224 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04224 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04224 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
P04224 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04224 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
P04224 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04224 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04224 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
P04224 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04224 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.19□□□□□ -0.14
P04224 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04224 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P04224 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
P04224 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P04224 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P04224 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P04224 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
P04224 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
P04224 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
P04224 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P04224 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P04224 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.18□□□□□ -0.14
P04224 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
P04224 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.18□□□□□ -0.14
P04224 Gm18025-201ENSMUST00000221733 862 ntBASIC14.18□□□□□ -0.14
P04224 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P04224 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
P04224 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P04224 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
P04224 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
P04224 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
P04224 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
P04224 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
P04224 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.18□□□□□ -0.14
P04224 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
P04224 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
P04224 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
P04224 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
P04224 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P04224 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P04224 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P04224 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
P04224 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.17□□□□□ -0.14
P04224 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
P04224 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
P04224 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P04224 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
P04224 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
P04224 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P04224 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P04224 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P04224 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P04224 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P04224 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.17□□□□□ -0.14
P04224 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P04224 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.17□□□□□ -0.14
P04224 Gm42545-201ENSMUST00000202755 922 ntBASIC14.17□□□□□ -0.14
P04224 Gm4974-201ENSMUST00000209974 875 ntBASIC14.17□□□□□ -0.14
P04224 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P04224 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
P04224 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
P04224 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
P04224 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
P04224 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P04224 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P04224 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
P04224 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
P04224 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
P04224 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
P04224 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
P04224 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
P04224 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
P04224 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
P04224 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04224 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.16□□□□□ -0.14
P04224 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04224 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
P04224 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms