Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a1P02463 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Col4a1P02463 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a1P02463 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a1P02463 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a1P02463 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a1P02463 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a1P02463 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a1P02463 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Col4a1P02463 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Col4a1P02463 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a1P02463 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a1P02463 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a1P02463 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Col4a1P02463 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC19.7■□□□□ 0.74
Col4a1P02463 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a1P02463 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a1P02463 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a1P02463 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Col4a1P02463 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a1P02463 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a1P02463 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Col4a1P02463 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a1P02463 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a1P02463 Gm26308-201ENSMUST00000157768 69 ntBASIC19.69■□□□□ 0.74
Col4a1P02463 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
Col4a1P02463 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC19.69■□□□□ 0.74
Col4a1P02463 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a1P02463 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a1P02463 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a1P02463 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC19.69■□□□□ 0.74
Col4a1P02463 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a1P02463 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a1P02463 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.69■□□□□ 0.74
Col4a1P02463 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a1P02463 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a1P02463 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC19.68■□□□□ 0.74
Col4a1P02463 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a1P02463 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a1P02463 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a1P02463 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC19.68■□□□□ 0.74
Col4a1P02463 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a1P02463 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Col4a1P02463 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a1P02463 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a1P02463 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a1P02463 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a1P02463 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.68■□□□□ 0.74
Col4a1P02463 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a1P02463 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a1P02463 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a1P02463 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Col4a1P02463 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Col4a1P02463 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a1P02463 AC155252.2-201ENSMUST00000226946 680 ntBASIC19.68■□□□□ 0.74
Col4a1P02463 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a1P02463 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Col4a1P02463 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a1P02463 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Col4a1P02463 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a1P02463 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col4a1P02463 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col4a1P02463 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Col4a1P02463 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Col4a1P02463 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col4a1P02463 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Col4a1P02463 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col4a1P02463 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col4a1P02463 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col4a1P02463 Gm13294-201ENSMUST00000121757 1330 ntBASIC19.67■□□□□ 0.74
Col4a1P02463 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Col4a1P02463 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Col4a1P02463 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col4a1P02463 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col4a1P02463 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col4a1P02463 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC19.66■□□□□ 0.74
Col4a1P02463 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC19.66■□□□□ 0.74
Col4a1P02463 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Col4a1P02463 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col4a1P02463 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col4a1P02463 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Col4a1P02463 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col4a1P02463 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col4a1P02463 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC19.65■□□□□ 0.74
Col4a1P02463 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC19.65■□□□□ 0.74
Col4a1P02463 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC19.65■□□□□ 0.74
Col4a1P02463 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a1P02463 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a1P02463 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a1P02463 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Col4a1P02463 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a1P02463 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a1P02463 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a1P02463 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a1P02463 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a1P02463 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Col4a1P02463 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a1P02463 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Col4a1P02463 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a1P02463 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms