Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.86□□□□□ -0.19
H3f3cP02301 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
H3f3cP02301 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H3f3cP02301 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
H3f3cP02301 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.86□□□□□ -0.19
H3f3cP02301 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
H3f3cP02301 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H3f3cP02301 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
H3f3cP02301 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.86□□□□□ -0.19
H3f3cP02301 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H3f3cP02301 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
H3f3cP02301 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H3f3cP02301 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
H3f3cP02301 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
H3f3cP02301 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.86□□□□□ -0.19
H3f3cP02301 Gm45328-201ENSMUST00000210942 917 ntBASIC13.86□□□□□ -0.19
H3f3cP02301 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H3f3cP02301 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H3f3cP02301 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.86□□□□□ -0.19
H3f3cP02301 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H3f3cP02301 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H3f3cP02301 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H3f3cP02301 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H3f3cP02301 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
H3f3cP02301 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
H3f3cP02301 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
H3f3cP02301 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
H3f3cP02301 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
H3f3cP02301 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.85□□□□□ -0.19
H3f3cP02301 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.85□□□□□ -0.19
H3f3cP02301 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.85□□□□□ -0.19
H3f3cP02301 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
H3f3cP02301 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
H3f3cP02301 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.85□□□□□ -0.19
H3f3cP02301 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
H3f3cP02301 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.85□□□□□ -0.19
H3f3cP02301 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
H3f3cP02301 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
H3f3cP02301 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
H3f3cP02301 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
H3f3cP02301 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.85□□□□□ -0.19
H3f3cP02301 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
H3f3cP02301 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
H3f3cP02301 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.84□□□□□ -0.19
H3f3cP02301 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
H3f3cP02301 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
H3f3cP02301 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.84□□□□□ -0.19
H3f3cP02301 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.84□□□□□ -0.19
H3f3cP02301 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
H3f3cP02301 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.84□□□□□ -0.19
H3f3cP02301 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms