Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Igh-VJ558P01758 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Igh-VJ558P01758 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Igh-VJ558P01758 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Igh-VJ558P01758 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Igh-VJ558P01758 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Igh-VJ558P01758 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Igh-VJ558P01758 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Igh-VJ558P01758 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Igh-VJ558P01758 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Igh-VJ558P01758 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Igh-VJ558P01758 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Gm25016-201ENSMUST00000158399 131 ntBASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Gm23634-201ENSMUST00000175071 91 ntBASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Mir7071-201ENSMUST00000184847 69 ntBASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Gm29518-201ENSMUST00000190858 372 ntBASIC13.95□□□□□ -0.18
Igh-VJ558P01758 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Igh-VJ558P01758 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Gm17808-201ENSMUST00000200859 894 ntBASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Igh-VJ558P01758 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Igh-VJ558P01758 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Igh-VJ558P01758 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Igh-VJ558P01758 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Igh-VJ558P01758 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Igh-VJ558P01758 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Igh-VJ558P01758 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Igh-VJ558P01758 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Igh-VJ558P01758 Gm15794-201ENSMUST00000120182 631 ntBASIC13.93□□□□□ -0.18
Igh-VJ558P01758 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.93□□□□□ -0.18
Igh-VJ558P01758 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.93□□□□□ -0.18
Igh-VJ558P01758 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Igh-VJ558P01758 Mir6404-201ENSMUST00000183699 94 ntBASIC13.93□□□□□ -0.18
Igh-VJ558P01758 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Igh-VJ558P01758 Gm45328-201ENSMUST00000210942 917 ntBASIC13.93□□□□□ -0.18
Igh-VJ558P01758 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.93□□□□□ -0.18
Igh-VJ558P01758 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Igh-VJ558P01758 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Igh-VJ558P01758 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Igh-VJ558P01758 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.93□□□□□ -0.18
Igh-VJ558P01758 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Igh-VJ558P01758 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Igh-VJ558P01758 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
Igh-VJ558P01758 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Igh-VJ558P01758 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms