Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
P01734 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.53■□□□□ 0.4
P01734 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01734 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
P01734 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01734 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01734 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01734 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
P01734 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P01734 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
P01734 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P01734 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
P01734 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
P01734 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P01734 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.52■□□□□ 0.4
P01734 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P01734 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
P01734 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P01734 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P01734 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.52■□□□□ 0.4
P01734 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P01734 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P01734 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
P01734 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
P01734 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
P01734 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
P01734 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
P01734 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
P01734 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
P01734 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01734 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01734 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
P01734 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
P01734 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01734 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
P01734 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
P01734 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01734 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01734 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.51■□□□□ 0.39
P01734 Gm25745-201ENSMUST00000174945 133 ntBASIC17.51■□□□□ 0.39
P01734 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
P01734 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
P01734 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01734 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01734 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
P01734 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
P01734 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
P01734 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01734 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P01734 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
P01734 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P01734 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P01734 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
P01734 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
P01734 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
P01734 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
P01734 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
P01734 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
P01734 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
P01734 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
P01734 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.5■□□□□ 0.39
P01734 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.5■□□□□ 0.39
P01734 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.5■□□□□ 0.39
P01734 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P01734 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
P01734 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
P01734 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
P01734 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
P01734 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
P01734 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01734 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01734 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
P01734 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01734 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01734 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
P01734 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01734 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01734 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01734 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
P01734 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.49■□□□□ 0.39
P01734 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01734 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.49■□□□□ 0.39
P01734 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01734 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
P01734 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01734 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01734 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01734 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
P01734 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
P01734 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01734 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01734 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
P01734 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
P01734 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
P01734 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.48■□□□□ 0.39
P01734 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
P01734 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.48■□□□□ 0.39
P01734 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.48■□□□□ 0.39
P01734 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.48■□□□□ 0.39
P01734 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms