Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CcnkO88874 Gm7638-201ENSMUST00000121348 967 ntBASIC14.38□□□□□ -0.11
CcnkO88874 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.38□□□□□ -0.11
CcnkO88874 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CcnkO88874 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.38□□□□□ -0.11
CcnkO88874 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.38□□□□□ -0.11
CcnkO88874 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CcnkO88874 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CcnkO88874 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CcnkO88874 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CcnkO88874 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CcnkO88874 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CcnkO88874 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CcnkO88874 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CcnkO88874 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CcnkO88874 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CcnkO88874 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CcnkO88874 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CcnkO88874 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CcnkO88874 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CcnkO88874 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CcnkO88874 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcnkO88874 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcnkO88874 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcnkO88874 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcnkO88874 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcnkO88874 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
CcnkO88874 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcnkO88874 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CcnkO88874 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcnkO88874 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.37□□□□□ -0.11
CcnkO88874 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CcnkO88874 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcnkO88874 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcnkO88874 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcnkO88874 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcnkO88874 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcnkO88874 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcnkO88874 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcnkO88874 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CcnkO88874 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.37□□□□□ -0.11
CcnkO88874 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.37□□□□□ -0.11
CcnkO88874 Il3ra-202ENSMUST00000223589 738 ntBASIC14.37□□□□□ -0.11
CcnkO88874 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcnkO88874 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcnkO88874 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CcnkO88874 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcnkO88874 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.37□□□□□ -0.11
CcnkO88874 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.37□□□□□ -0.11
CcnkO88874 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CcnkO88874 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.37□□□□□ -0.11
CcnkO88874 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcnkO88874 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CcnkO88874 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CcnkO88874 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
CcnkO88874 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcnkO88874 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcnkO88874 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CcnkO88874 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
CcnkO88874 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcnkO88874 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcnkO88874 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.36□□□□□ -0.11
CcnkO88874 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcnkO88874 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcnkO88874 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.36□□□□□ -0.11
CcnkO88874 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.36□□□□□ -0.11
CcnkO88874 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcnkO88874 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcnkO88874 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcnkO88874 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.36□□□□□ -0.11
CcnkO88874 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CcnkO88874 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CcnkO88874 Gm21814-202ENSMUST00000203277 873 ntBASIC14.36□□□□□ -0.11
CcnkO88874 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.36□□□□□ -0.11
CcnkO88874 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcnkO88874 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcnkO88874 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcnkO88874 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CcnkO88874 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcnkO88874 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcnkO88874 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcnkO88874 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CcnkO88874 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcnkO88874 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcnkO88874 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcnkO88874 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcnkO88874 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CcnkO88874 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.36□□□□□ -0.11
CcnkO88874 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcnkO88874 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcnkO88874 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcnkO88874 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcnkO88874 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcnkO88874 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcnkO88874 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcnkO88874 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
CcnkO88874 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcnkO88874 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CcnkO88874 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CcnkO88874 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms