Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.66■□□□□ 0.74
Cops6O88545 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.66■□□□□ 0.74
Cops6O88545 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cops6O88545 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cops6O88545 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cops6O88545 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cops6O88545 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cops6O88545 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cops6O88545 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cops6O88545 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cops6O88545 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cops6O88545 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cops6O88545 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cops6O88545 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cops6O88545 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.65■□□□□ 0.74
Cops6O88545 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC19.65■□□□□ 0.74
Cops6O88545 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC19.65■□□□□ 0.74
Cops6O88545 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC19.65■□□□□ 0.74
Cops6O88545 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cops6O88545 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cops6O88545 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cops6O88545 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cops6O88545 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cops6O88545 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cops6O88545 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cops6O88545 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cops6O88545 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cops6O88545 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cops6O88545 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cops6O88545 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cops6O88545 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cops6O88545 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cops6O88545 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Cops6O88545 AC084391.1-201ENSMUST00000200651 141 ntBASIC19.64■□□□□ 0.73
Cops6O88545 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cops6O88545 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC19.64■□□□□ 0.73
Cops6O88545 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cops6O88545 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cops6O88545 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
Cops6O88545 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cops6O88545 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.63■□□□□ 0.73
Cops6O88545 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cops6O88545 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cops6O88545 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Cops6O88545 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cops6O88545 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.63■□□□□ 0.73
Cops6O88545 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.63■□□□□ 0.73
Cops6O88545 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Cops6O88545 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.63■□□□□ 0.73
Cops6O88545 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC19.63■□□□□ 0.73
Cops6O88545 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cops6O88545 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cops6O88545 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Cops6O88545 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.63■□□□□ 0.73
Cops6O88545 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Cops6O88545 Gm9727-201ENSMUST00000161387 555 ntBASIC19.63■□□□□ 0.73
Cops6O88545 Gm5682-201ENSMUST00000173402 505 ntBASIC19.63■□□□□ 0.73
Cops6O88545 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC19.63■□□□□ 0.73
Cops6O88545 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC19.63■□□□□ 0.73
Cops6O88545 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cops6O88545 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Cops6O88545 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cops6O88545 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cops6O88545 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cops6O88545 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cops6O88545 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cops6O88545 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cops6O88545 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cops6O88545 AC131586.3-201ENSMUST00000228355 1367 ntBASIC19.62■□□□□ 0.73
Cops6O88545 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cops6O88545 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cops6O88545 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cops6O88545 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cops6O88545 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cops6O88545 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cops6O88545 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cops6O88545 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cops6O88545 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cops6O88545 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Cops6O88545 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.61■□□□□ 0.73
Cops6O88545 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cops6O88545 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cops6O88545 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cops6O88545 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cops6O88545 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Cops6O88545 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cops6O88545 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cops6O88545 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Cops6O88545 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cops6O88545 Gm14494-201ENSMUST00000118786 435 ntBASIC19.61■□□□□ 0.73
Cops6O88545 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Cops6O88545 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cops6O88545 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC19.61■□□□□ 0.73
Cops6O88545 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cops6O88545 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cops6O88545 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Cops6O88545 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC19.61■□□□□ 0.73
Cops6O88545 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cops6O88545 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cops6O88545 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms