Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.47□□□□□ -0.09
Cops3O88543 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cops3O88543 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.47□□□□□ -0.09
Cops3O88543 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cops3O88543 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.47□□□□□ -0.09
Cops3O88543 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cops3O88543 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.47□□□□□ -0.09
Cops3O88543 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops3O88543 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops3O88543 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cops3O88543 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops3O88543 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cops3O88543 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cops3O88543 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops3O88543 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops3O88543 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops3O88543 Prob1-201ENSMUST00000097619 3021 ntBASIC14.46□□□□□ -0.09
Cops3O88543 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops3O88543 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops3O88543 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cops3O88543 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops3O88543 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops3O88543 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Cops3O88543 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops3O88543 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cops3O88543 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.46□□□□□ -0.09
Cops3O88543 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops3O88543 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops3O88543 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cops3O88543 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cops3O88543 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cops3O88543 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cops3O88543 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cops3O88543 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops3O88543 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cops3O88543 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cops3O88543 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops3O88543 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.45□□□□□ -0.1
Cops3O88543 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cops3O88543 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops3O88543 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops3O88543 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops3O88543 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops3O88543 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops3O88543 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops3O88543 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cops3O88543 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops3O88543 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cops3O88543 Gm11539-201ENSMUST00000119837 557 ntBASIC14.45□□□□□ -0.1
Cops3O88543 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Cops3O88543 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops3O88543 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.45□□□□□ -0.1
Cops3O88543 Gm27463-201ENSMUST00000183569 57 ntBASIC14.45□□□□□ -0.1
Cops3O88543 Gm8520-201ENSMUST00000186517 868 ntBASIC14.45□□□□□ -0.1
Cops3O88543 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops3O88543 Gm44450-201ENSMUST00000199528 114 ntBASIC14.45□□□□□ -0.1
Cops3O88543 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops3O88543 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.45□□□□□ -0.1
Cops3O88543 Gm7370-201ENSMUST00000219471 767 ntBASIC14.45□□□□□ -0.1
Cops3O88543 Gm18115-201ENSMUST00000221209 621 ntBASIC14.45□□□□□ -0.1
Cops3O88543 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cops3O88543 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops3O88543 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops3O88543 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops3O88543 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cops3O88543 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops3O88543 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops3O88543 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cops3O88543 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Cops3O88543 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops3O88543 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops3O88543 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops3O88543 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops3O88543 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cops3O88543 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cops3O88543 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops3O88543 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops3O88543 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops3O88543 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cops3O88543 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops3O88543 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops3O88543 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.44□□□□□ -0.1
Cops3O88543 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cops3O88543 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops3O88543 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops3O88543 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops3O88543 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops3O88543 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cops3O88543 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.44□□□□□ -0.1
Cops3O88543 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms