Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tgfbr3O88393 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.28■□□□□ 0.04
Tgfbr3O88393 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tgfbr3O88393 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Tgfbr3O88393 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tgfbr3O88393 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
Tgfbr3O88393 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tgfbr3O88393 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tgfbr3O88393 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tgfbr3O88393 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.28■□□□□ 0.04
Tgfbr3O88393 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tgfbr3O88393 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tgfbr3O88393 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tgfbr3O88393 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tgfbr3O88393 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Tgfbr3O88393 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tgfbr3O88393 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tgfbr3O88393 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tgfbr3O88393 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tgfbr3O88393 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tgfbr3O88393 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tgfbr3O88393 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Tgfbr3O88393 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Tgfbr3O88393 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tgfbr3O88393 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tgfbr3O88393 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tgfbr3O88393 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tgfbr3O88393 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tgfbr3O88393 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tgfbr3O88393 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tgfbr3O88393 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.27■□□□□ 0.04
Tgfbr3O88393 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.27■□□□□ 0.04
Tgfbr3O88393 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tgfbr3O88393 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.27■□□□□ 0.04
Tgfbr3O88393 Gm5682-201ENSMUST00000173402 505 ntBASIC15.27■□□□□ 0.04
Tgfbr3O88393 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tgfbr3O88393 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.27■□□□□ 0.04
Tgfbr3O88393 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.27■□□□□ 0.04
Tgfbr3O88393 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tgfbr3O88393 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.27■□□□□ 0.04
Tgfbr3O88393 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tgfbr3O88393 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tgfbr3O88393 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.27■□□□□ 0.03
Tgfbr3O88393 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tgfbr3O88393 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tgfbr3O88393 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tgfbr3O88393 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.27■□□□□ 0.03
Tgfbr3O88393 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tgfbr3O88393 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tgfbr3O88393 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tgfbr3O88393 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Mir3113-201ENSMUST00000175478 76 ntBASIC15.26■□□□□ 0.03
Tgfbr3O88393 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tgfbr3O88393 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tgfbr3O88393 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tgfbr3O88393 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tgfbr3O88393 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Tgfbr3O88393 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tgfbr3O88393 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.25■□□□□ 0.03
Tgfbr3O88393 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tgfbr3O88393 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tgfbr3O88393 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tgfbr3O88393 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.25■□□□□ 0.03
Tgfbr3O88393 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.25■□□□□ 0.03
Tgfbr3O88393 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.25■□□□□ 0.03
Tgfbr3O88393 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.25■□□□□ 0.03
Tgfbr3O88393 Gm11764-201ENSMUST00000120221 623 ntBASIC15.25■□□□□ 0.03
Tgfbr3O88393 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.25■□□□□ 0.03
Tgfbr3O88393 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.25■□□□□ 0.03
Tgfbr3O88393 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.25■□□□□ 0.03
Tgfbr3O88393 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.25■□□□□ 0.03
Tgfbr3O88393 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.25■□□□□ 0.03
Tgfbr3O88393 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.25■□□□□ 0.03
Tgfbr3O88393 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.25■□□□□ 0.03
Tgfbr3O88393 Gm8825-201ENSMUST00000182565 998 ntBASIC15.25■□□□□ 0.03
Tgfbr3O88393 Gm4518-201ENSMUST00000182638 718 ntBASIC15.25■□□□□ 0.03
Tgfbr3O88393 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms