Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col5a1O88207 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col5a1O88207 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.45□□□□□ -0.1
Col5a1O88207 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Col5a1O88207 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col5a1O88207 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col5a1O88207 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.45□□□□□ -0.1
Col5a1O88207 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col5a1O88207 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.45□□□□□ -0.1
Col5a1O88207 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col5a1O88207 Gm27494-201ENSMUST00000184735 189 ntBASIC14.45□□□□□ -0.1
Col5a1O88207 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.45□□□□□ -0.1
Col5a1O88207 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col5a1O88207 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col5a1O88207 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col5a1O88207 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col5a1O88207 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col5a1O88207 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col5a1O88207 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col5a1O88207 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col5a1O88207 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col5a1O88207 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col5a1O88207 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col5a1O88207 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col5a1O88207 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col5a1O88207 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col5a1O88207 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col5a1O88207 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Col5a1O88207 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.44□□□□□ -0.1
Col5a1O88207 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Col5a1O88207 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col5a1O88207 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col5a1O88207 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col5a1O88207 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col5a1O88207 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col5a1O88207 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col5a1O88207 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Col5a1O88207 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col5a1O88207 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Col5a1O88207 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col5a1O88207 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Col5a1O88207 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col5a1O88207 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col5a1O88207 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col5a1O88207 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Col5a1O88207 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col5a1O88207 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.43□□□□□ -0.1
Col5a1O88207 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Col5a1O88207 AC124392.1-201ENSMUST00000225172 5324 ntBASIC14.43□□□□□ -0.1
Col5a1O88207 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col5a1O88207 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col5a1O88207 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Col5a1O88207 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col5a1O88207 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col5a1O88207 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Col5a1O88207 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col5a1O88207 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col5a1O88207 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.43□□□□□ -0.1
Col5a1O88207 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col5a1O88207 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col5a1O88207 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col5a1O88207 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.43□□□□□ -0.1
Col5a1O88207 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col5a1O88207 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col5a1O88207 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col5a1O88207 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col5a1O88207 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col5a1O88207 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col5a1O88207 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col5a1O88207 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Col5a1O88207 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col5a1O88207 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col5a1O88207 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col5a1O88207 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col5a1O88207 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col5a1O88207 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col5a1O88207 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Col5a1O88207 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Col5a1O88207 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col5a1O88207 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.42□□□□□ -0.1
Col5a1O88207 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.42□□□□□ -0.1
Col5a1O88207 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.42□□□□□ -0.1
Col5a1O88207 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.42□□□□□ -0.1
Col5a1O88207 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.42□□□□□ -0.1
Col5a1O88207 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.42□□□□□ -0.1
Col5a1O88207 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col5a1O88207 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.42□□□□□ -0.1
Col5a1O88207 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Col5a1O88207 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.42□□□□□ -0.1
Col5a1O88207 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.42□□□□□ -0.1
Col5a1O88207 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.42□□□□□ -0.1
Col5a1O88207 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.42□□□□□ -0.1
Col5a1O88207 Gm8825-201ENSMUST00000182565 998 ntBASIC14.42□□□□□ -0.1
Col5a1O88207 Gm4518-201ENSMUST00000182638 718 ntBASIC14.42□□□□□ -0.1
Col5a1O88207 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.42□□□□□ -0.1
Col5a1O88207 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.42□□□□□ -0.1
Col5a1O88207 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.42□□□□□ -0.1
Col5a1O88207 Gm37153-201ENSMUST00000193637 231 ntBASIC14.42□□□□□ -0.1
Col5a1O88207 Gm44335-201ENSMUST00000196879 141 ntBASIC14.42□□□□□ -0.1
Col5a1O88207 Gm44297-201ENSMUST00000198304 141 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms