Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ttc3O88196 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.84■□□□□ 0.29
Ttc3O88196 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ttc3O88196 Gm10175-201ENSMUST00000086013 645 ntBASIC16.84■□□□□ 0.29
Ttc3O88196 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Ttc3O88196 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.84■□□□□ 0.29
Ttc3O88196 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.84■□□□□ 0.29
Ttc3O88196 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Ttc3O88196 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Ttc3O88196 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ttc3O88196 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ttc3O88196 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.83■□□□□ 0.29
Ttc3O88196 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Ttc3O88196 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ttc3O88196 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ttc3O88196 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ttc3O88196 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ttc3O88196 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.83■□□□□ 0.28
Ttc3O88196 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ttc3O88196 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ttc3O88196 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ttc3O88196 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ttc3O88196 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.83■□□□□ 0.28
Ttc3O88196 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ttc3O88196 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ttc3O88196 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ttc3O88196 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ttc3O88196 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc3O88196 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ttc3O88196 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc3O88196 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc3O88196 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Ttc3O88196 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc3O88196 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.82■□□□□ 0.28
Ttc3O88196 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.82■□□□□ 0.28
Ttc3O88196 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc3O88196 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc3O88196 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc3O88196 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc3O88196 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc3O88196 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc3O88196 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.82■□□□□ 0.28
Ttc3O88196 Grk6-207ENSMUST00000225925 2769 ntBASIC16.82■□□□□ 0.28
Ttc3O88196 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc3O88196 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc3O88196 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc3O88196 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc3O88196 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc3O88196 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc3O88196 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc3O88196 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc3O88196 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc3O88196 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.82■□□□□ 0.28
Ttc3O88196 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.82■□□□□ 0.28
Ttc3O88196 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc3O88196 Gm25911-201ENSMUST00000157621 56 ntBASIC16.82■□□□□ 0.28
Ttc3O88196 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc3O88196 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc3O88196 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Ttc3O88196 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ttc3O88196 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ttc3O88196 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ttc3O88196 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ttc3O88196 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ttc3O88196 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.81■□□□□ 0.28
Ttc3O88196 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ttc3O88196 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ttc3O88196 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.81■□□□□ 0.28
Ttc3O88196 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ttc3O88196 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ttc3O88196 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ttc3O88196 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ttc3O88196 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
Ttc3O88196 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc3O88196 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc3O88196 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc3O88196 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc3O88196 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc3O88196 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc3O88196 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc3O88196 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc3O88196 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc3O88196 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc3O88196 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc3O88196 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc3O88196 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc3O88196 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ttc3O88196 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc3O88196 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc3O88196 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc3O88196 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.8■□□□□ 0.28
Ttc3O88196 Gm7222-201ENSMUST00000117512 906 ntBASIC16.8■□□□□ 0.28
Ttc3O88196 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ttc3O88196 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.8■□□□□ 0.28
Ttc3O88196 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.8■□□□□ 0.28
Ttc3O88196 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc3O88196 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ttc3O88196 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ttc3O88196 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ttc3O88196 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms