Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Pdlim1O70400 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pdlim1O70400 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
Pdlim1O70400 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.91■□□□□ 0.14
Pdlim1O70400 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pdlim1O70400 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim1O70400 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.91■□□□□ 0.14
Pdlim1O70400 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim1O70400 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Pdlim1O70400 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pdlim1O70400 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim1O70400 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim1O70400 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim1O70400 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim1O70400 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim1O70400 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim1O70400 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim1O70400 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.9■□□□□ 0.14
Pdlim1O70400 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim1O70400 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim1O70400 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pdlim1O70400 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim1O70400 Gm9103-201ENSMUST00000119371 405 ntBASIC15.9■□□□□ 0.14
Pdlim1O70400 Gm12895-201ENSMUST00000122214 226 ntBASIC15.9■□□□□ 0.14
Pdlim1O70400 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim1O70400 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.9■□□□□ 0.14
Pdlim1O70400 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.9■□□□□ 0.14
Pdlim1O70400 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.9■□□□□ 0.14
Pdlim1O70400 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim1O70400 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim1O70400 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim1O70400 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim1O70400 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim1O70400 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim1O70400 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim1O70400 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim1O70400 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim1O70400 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Pdlim1O70400 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim1O70400 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.89■□□□□ 0.13
Pdlim1O70400 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pdlim1O70400 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim1O70400 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim1O70400 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim1O70400 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim1O70400 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim1O70400 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim1O70400 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim1O70400 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Pdlim1O70400 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim1O70400 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim1O70400 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim1O70400 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Pdlim1O70400 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.89■□□□□ 0.13
Pdlim1O70400 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim1O70400 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.89■□□□□ 0.13
Pdlim1O70400 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.89■□□□□ 0.13
Pdlim1O70400 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim1O70400 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Pdlim1O70400 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim1O70400 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim1O70400 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim1O70400 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim1O70400 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim1O70400 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim1O70400 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim1O70400 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim1O70400 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim1O70400 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Pdlim1O70400 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim1O70400 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim1O70400 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pdlim1O70400 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim1O70400 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim1O70400 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim1O70400 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim1O70400 Gm15165-201ENSMUST00000118140 502 ntBASIC15.88■□□□□ 0.13
Pdlim1O70400 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.88■□□□□ 0.13
Pdlim1O70400 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim1O70400 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim1O70400 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim1O70400 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.88■□□□□ 0.13
Pdlim1O70400 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim1O70400 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.88■□□□□ 0.13
Pdlim1O70400 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Pdlim1O70400 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim1O70400 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim1O70400 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim1O70400 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim1O70400 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim1O70400 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim1O70400 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.87■□□□□ 0.13
Pdlim1O70400 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.87■□□□□ 0.13
Pdlim1O70400 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.87■□□□□ 0.13
Pdlim1O70400 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.87■□□□□ 0.13
Pdlim1O70400 Gm28033-201ENSMUST00000184224 96 ntBASIC15.87■□□□□ 0.13
Pdlim1O70400 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.87■□□□□ 0.13
Pdlim1O70400 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pdlim1O70400 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pdlim1O70400 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms