Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pja1O55176 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pja1O55176 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Pja1O55176 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pja1O55176 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Pja1O55176 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Pja1O55176 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pja1O55176 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pja1O55176 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pja1O55176 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pja1O55176 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pja1O55176 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pja1O55176 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pja1O55176 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pja1O55176 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pja1O55176 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pja1O55176 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pja1O55176 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pja1O55176 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pja1O55176 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.05■□□□□ 0.32
Pja1O55176 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pja1O55176 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pja1O55176 Gm10812-201ENSMUST00000099864 546 ntBASIC17.05■□□□□ 0.32
Pja1O55176 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pja1O55176 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pja1O55176 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pja1O55176 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pja1O55176 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.05■□□□□ 0.32
Pja1O55176 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pja1O55176 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pja1O55176 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pja1O55176 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Pja1O55176 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pja1O55176 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.04■□□□□ 0.32
Pja1O55176 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Pja1O55176 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.04■□□□□ 0.32
Pja1O55176 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pja1O55176 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pja1O55176 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Pja1O55176 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pja1O55176 Gm22240-201ENSMUST00000175225 82 ntBASIC17.04■□□□□ 0.32
Pja1O55176 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.04■□□□□ 0.32
Pja1O55176 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pja1O55176 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pja1O55176 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pja1O55176 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pja1O55176 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pja1O55176 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pja1O55176 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pja1O55176 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pja1O55176 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pja1O55176 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.03■□□□□ 0.32
Pja1O55176 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Pja1O55176 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pja1O55176 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pja1O55176 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pja1O55176 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pja1O55176 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pja1O55176 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pja1O55176 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Pja1O55176 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pja1O55176 Gm30025-201ENSMUST00000218555 728 ntBASIC17.03■□□□□ 0.32
Pja1O55176 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pja1O55176 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pja1O55176 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pja1O55176 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pja1O55176 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pja1O55176 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pja1O55176 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pja1O55176 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pja1O55176 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pja1O55176 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pja1O55176 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pja1O55176 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pja1O55176 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Pja1O55176 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pja1O55176 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pja1O55176 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pja1O55176 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pja1O55176 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.02■□□□□ 0.32
Pja1O55176 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pja1O55176 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pja1O55176 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pja1O55176 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pja1O55176 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pja1O55176 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pja1O55176 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pja1O55176 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.02■□□□□ 0.31
Pja1O55176 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pja1O55176 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pja1O55176 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pja1O55176 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pja1O55176 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pja1O55176 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pja1O55176 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pja1O55176 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.01■□□□□ 0.31
Pja1O55176 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pja1O55176 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pja1O55176 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pja1O55176 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms