Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm45167-201ENSMUST00000208007 322 ntBASIC17.72■□□□□ 0.43
Trdmt1O55055 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trdmt1O55055 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.72■□□□□ 0.43
Trdmt1O55055 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.72■□□□□ 0.43
Trdmt1O55055 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trdmt1O55055 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trdmt1O55055 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trdmt1O55055 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trdmt1O55055 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trdmt1O55055 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trdmt1O55055 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trdmt1O55055 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trdmt1O55055 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trdmt1O55055 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trdmt1O55055 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trdmt1O55055 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trdmt1O55055 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trdmt1O55055 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trdmt1O55055 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trdmt1O55055 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Trdmt1O55055 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trdmt1O55055 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.71■□□□□ 0.43
Trdmt1O55055 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.71■□□□□ 0.43
Trdmt1O55055 Gm8344-201ENSMUST00000119813 856 ntBASIC17.71■□□□□ 0.43
Trdmt1O55055 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trdmt1O55055 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trdmt1O55055 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.71■□□□□ 0.43
Trdmt1O55055 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.71■□□□□ 0.43
Trdmt1O55055 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trdmt1O55055 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trdmt1O55055 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trdmt1O55055 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trdmt1O55055 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trdmt1O55055 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trdmt1O55055 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Trdmt1O55055 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trdmt1O55055 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trdmt1O55055 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Trdmt1O55055 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Trdmt1O55055 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trdmt1O55055 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Trdmt1O55055 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trdmt1O55055 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trdmt1O55055 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trdmt1O55055 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trdmt1O55055 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trdmt1O55055 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.7■□□□□ 0.42
Trdmt1O55055 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trdmt1O55055 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.7■□□□□ 0.42
Trdmt1O55055 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trdmt1O55055 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.7■□□□□ 0.42
Trdmt1O55055 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trdmt1O55055 Gm37153-201ENSMUST00000193637 231 ntBASIC17.7■□□□□ 0.42
Trdmt1O55055 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.7■□□□□ 0.42
Trdmt1O55055 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.7■□□□□ 0.42
Trdmt1O55055 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trdmt1O55055 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trdmt1O55055 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trdmt1O55055 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trdmt1O55055 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trdmt1O55055 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trdmt1O55055 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.7■□□□□ 0.42
Trdmt1O55055 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trdmt1O55055 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.7■□□□□ 0.42
Trdmt1O55055 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trdmt1O55055 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trdmt1O55055 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trdmt1O55055 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trdmt1O55055 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trdmt1O55055 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trdmt1O55055 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trdmt1O55055 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trdmt1O55055 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trdmt1O55055 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.69■□□□□ 0.42
Trdmt1O55055 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Trdmt1O55055 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.69■□□□□ 0.42
Trdmt1O55055 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.69■□□□□ 0.42
Trdmt1O55055 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trdmt1O55055 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.69■□□□□ 0.42
Trdmt1O55055 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trdmt1O55055 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trdmt1O55055 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.69■□□□□ 0.42
Trdmt1O55055 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trdmt1O55055 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trdmt1O55055 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trdmt1O55055 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.69■□□□□ 0.42
Trdmt1O55055 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.69■□□□□ 0.42
Trdmt1O55055 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trdmt1O55055 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Trdmt1O55055 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trdmt1O55055 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trdmt1O55055 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trdmt1O55055 Gm4899-201ENSMUST00000178708 719 ntBASIC17.68■□□□□ 0.42
Trdmt1O55055 Gm27300-201ENSMUST00000184085 97 ntBASIC17.68■□□□□ 0.42
Trdmt1O55055 Gm27335-201ENSMUST00000184758 97 ntBASIC17.68■□□□□ 0.42
Trdmt1O55055 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.68■□□□□ 0.42
Trdmt1O55055 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trdmt1O55055 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trdmt1O55055 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trdmt1O55055 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms