Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SncaO55042 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SncaO55042 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
SncaO55042 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.37□□□□□ -0.27
SncaO55042 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.37□□□□□ -0.27
SncaO55042 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.37□□□□□ -0.27
SncaO55042 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SncaO55042 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SncaO55042 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SncaO55042 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SncaO55042 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SncaO55042 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SncaO55042 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SncaO55042 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
SncaO55042 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SncaO55042 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SncaO55042 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SncaO55042 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.36□□□□□ -0.27
SncaO55042 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.36□□□□□ -0.27
SncaO55042 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
SncaO55042 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.36□□□□□ -0.27
SncaO55042 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SncaO55042 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SncaO55042 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SncaO55042 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SncaO55042 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SncaO55042 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SncaO55042 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SncaO55042 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SncaO55042 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SncaO55042 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SncaO55042 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SncaO55042 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SncaO55042 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SncaO55042 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.35□□□□□ -0.27
SncaO55042 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.35□□□□□ -0.27
SncaO55042 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SncaO55042 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SncaO55042 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SncaO55042 Gm10812-201ENSMUST00000099864 546 ntBASIC13.35□□□□□ -0.27
SncaO55042 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SncaO55042 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SncaO55042 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SncaO55042 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SncaO55042 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SncaO55042 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SncaO55042 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SncaO55042 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
SncaO55042 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SncaO55042 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.35□□□□□ -0.27
SncaO55042 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SncaO55042 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SncaO55042 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SncaO55042 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SncaO55042 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.34□□□□□ -0.27
SncaO55042 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SncaO55042 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SncaO55042 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SncaO55042 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SncaO55042 Gm13186-201ENSMUST00000118031 316 ntBASIC13.34□□□□□ -0.27
SncaO55042 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms