Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.34■□□□□ 0.21
Limk2O54785 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Limk2O54785 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Limk2O54785 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Limk2O54785 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Limk2O54785 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
Limk2O54785 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Limk2O54785 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Limk2O54785 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Limk2O54785 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Limk2O54785 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Limk2O54785 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Limk2O54785 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Limk2O54785 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Limk2O54785 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Limk2O54785 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Limk2O54785 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Limk2O54785 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Limk2O54785 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Limk2O54785 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Limk2O54785 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Limk2O54785 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.33■□□□□ 0.2
Limk2O54785 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Limk2O54785 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Limk2O54785 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.33■□□□□ 0.2
Limk2O54785 Gm5867-201ENSMUST00000063197 592 ntBASIC16.33■□□□□ 0.2
Limk2O54785 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Limk2O54785 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Limk2O54785 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Limk2O54785 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Limk2O54785 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Limk2O54785 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Limk2O54785 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Limk2O54785 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Limk2O54785 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Limk2O54785 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Limk2O54785 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Limk2O54785 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Limk2O54785 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Limk2O54785 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Limk2O54785 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Limk2O54785 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Limk2O54785 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.32■□□□□ 0.2
Limk2O54785 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Limk2O54785 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Limk2O54785 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Limk2O54785 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.32■□□□□ 0.2
Limk2O54785 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Limk2O54785 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Limk2O54785 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Limk2O54785 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Limk2O54785 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Limk2O54785 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Limk2O54785 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Limk2O54785 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Limk2O54785 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.32■□□□□ 0.2
Limk2O54785 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Limk2O54785 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Limk2O54785 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Limk2O54785 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Limk2O54785 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Limk2O54785 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Limk2O54785 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Limk2O54785 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Limk2O54785 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Limk2O54785 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Limk2O54785 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Limk2O54785 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Limk2O54785 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Limk2O54785 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.31■□□□□ 0.2
Limk2O54785 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.31■□□□□ 0.2
Limk2O54785 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.31■□□□□ 0.2
Limk2O54785 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.31■□□□□ 0.2
Limk2O54785 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.31■□□□□ 0.2
Limk2O54785 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.31■□□□□ 0.2
Limk2O54785 Gm18733-201ENSMUST00000173950 856 ntBASIC16.31■□□□□ 0.2
Limk2O54785 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Limk2O54785 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Limk2O54785 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Limk2O54785 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.31■□□□□ 0.2
Limk2O54785 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Limk2O54785 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Limk2O54785 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.31■□□□□ 0.2
Limk2O54785 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Limk2O54785 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Limk2O54785 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.31■□□□□ 0.2
Limk2O54785 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Limk2O54785 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Limk2O54785 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Limk2O54785 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Limk2O54785 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Limk2O54785 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Limk2O54785 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Limk2O54785 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Limk2O54785 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Limk2O54785 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Limk2O54785 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.3■□□□□ 0.2
Limk2O54785 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Limk2O54785 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.3■□□□□ 0.2
Limk2O54785 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms