Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Phox2bO35690 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.17■□□□□ 0.18
Phox2bO35690 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Phox2bO35690 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Phox2bO35690 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Phox2bO35690 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Phox2bO35690 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.17■□□□□ 0.18
Phox2bO35690 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.17■□□□□ 0.18
Phox2bO35690 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Phox2bO35690 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.17■□□□□ 0.18
Phox2bO35690 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Phox2bO35690 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.17■□□□□ 0.18
Phox2bO35690 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Phox2bO35690 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Phox2bO35690 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Phox2bO35690 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Phox2bO35690 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Phox2bO35690 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Phox2bO35690 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Phox2bO35690 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Phox2bO35690 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Phox2bO35690 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Phox2bO35690 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Phox2bO35690 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Phox2bO35690 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Phox2bO35690 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Phox2bO35690 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Phox2bO35690 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.17■□□□□ 0.18
Phox2bO35690 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Phox2bO35690 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Phox2bO35690 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Phox2bO35690 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Phox2bO35690 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Phox2bO35690 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Phox2bO35690 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Phox2bO35690 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Phox2bO35690 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Phox2bO35690 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Phox2bO35690 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Phox2bO35690 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Phox2bO35690 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Phox2bO35690 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.16■□□□□ 0.18
Phox2bO35690 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Phox2bO35690 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Phox2bO35690 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Phox2bO35690 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Phox2bO35690 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Phox2bO35690 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Phox2bO35690 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Phox2bO35690 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Phox2bO35690 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Phox2bO35690 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Phox2bO35690 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Phox2bO35690 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Phox2bO35690 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Phox2bO35690 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Phox2bO35690 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Phox2bO35690 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Phox2bO35690 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Phox2bO35690 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Phox2bO35690 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Phox2bO35690 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Phox2bO35690 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Phox2bO35690 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Phox2bO35690 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Phox2bO35690 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Phox2bO35690 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.15■□□□□ 0.18
Phox2bO35690 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.15■□□□□ 0.18
Phox2bO35690 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Phox2bO35690 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Phox2bO35690 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.15■□□□□ 0.18
Phox2bO35690 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Phox2bO35690 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Phox2bO35690 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Phox2bO35690 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Phox2bO35690 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Phox2bO35690 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Phox2bO35690 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Phox2bO35690 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Phox2bO35690 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.14■□□□□ 0.17
Phox2bO35690 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Phox2bO35690 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Phox2bO35690 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Phox2bO35690 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Phox2bO35690 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Phox2bO35690 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Phox2bO35690 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Phox2bO35690 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Phox2bO35690 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.14■□□□□ 0.17
Phox2bO35690 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Phox2bO35690 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Phox2bO35690 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Phox2bO35690 Gm12106-201ENSMUST00000116006 1200 ntBASIC16.14■□□□□ 0.17
Phox2bO35690 Gm23547-201ENSMUST00000158210 271 ntBASIC16.14■□□□□ 0.17
Phox2bO35690 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.14■□□□□ 0.17
Phox2bO35690 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
Phox2bO35690 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.14■□□□□ 0.17
Phox2bO35690 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Phox2bO35690 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.14■□□□□ 0.17
Phox2bO35690 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms