Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptch2O35595 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptch2O35595 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptch2O35595 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptch2O35595 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.5■□□□□ 0.23
Ptch2O35595 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptch2O35595 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptch2O35595 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.5■□□□□ 0.23
Ptch2O35595 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.5■□□□□ 0.23
Ptch2O35595 Mir5126-201ENSMUST00000175513 77 ntBASIC16.5■□□□□ 0.23
Ptch2O35595 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.5■□□□□ 0.23
Ptch2O35595 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.5■□□□□ 0.23
Ptch2O35595 Gm5364-201ENSMUST00000216789 889 ntBASIC16.5■□□□□ 0.23
Ptch2O35595 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptch2O35595 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptch2O35595 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ptch2O35595 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Ptch2O35595 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptch2O35595 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptch2O35595 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptch2O35595 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptch2O35595 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ptch2O35595 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptch2O35595 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptch2O35595 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ptch2O35595 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ptch2O35595 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptch2O35595 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ptch2O35595 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Ptch2O35595 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptch2O35595 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
Ptch2O35595 Gm15173-201ENSMUST00000122049 433 ntBASIC16.49■□□□□ 0.23
Ptch2O35595 Gm4535-201ENSMUST00000182274 558 ntBASIC16.49■□□□□ 0.23
Ptch2O35595 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ptch2O35595 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.49■□□□□ 0.23
Ptch2O35595 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.49■□□□□ 0.23
Ptch2O35595 Gm36967-201ENSMUST00000193814 266 ntBASIC16.49■□□□□ 0.23
Ptch2O35595 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptch2O35595 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptch2O35595 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ptch2O35595 Gm10355-201ENSMUST00000097146 517 ntBASIC16.49■□□□□ 0.23
Ptch2O35595 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptch2O35595 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ptch2O35595 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptch2O35595 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptch2O35595 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptch2O35595 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ptch2O35595 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptch2O35595 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ptch2O35595 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ptch2O35595 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ptch2O35595 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ptch2O35595 Gm4459-201ENSMUST00000118750 468 ntBASIC16.48■□□□□ 0.23
Ptch2O35595 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.48■□□□□ 0.23
Ptch2O35595 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ptch2O35595 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ptch2O35595 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ptch2O35595 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ptch2O35595 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.48■□□□□ 0.23
Ptch2O35595 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Ptch2O35595 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ptch2O35595 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.48■□□□□ 0.23
Ptch2O35595 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ptch2O35595 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ptch2O35595 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ptch2O35595 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ptch2O35595 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ptch2O35595 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ptch2O35595 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ptch2O35595 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.47■□□□□ 0.23
Ptch2O35595 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ptch2O35595 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ptch2O35595 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptch2O35595 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.47■□□□□ 0.23
Ptch2O35595 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Ptch2O35595 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ptch2O35595 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptch2O35595 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptch2O35595 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptch2O35595 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Ptch2O35595 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptch2O35595 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptch2O35595 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ptch2O35595 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Ptch2O35595 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.47■□□□□ 0.23
Ptch2O35595 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.47■□□□□ 0.23
Ptch2O35595 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.47■□□□□ 0.23
Ptch2O35595 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptch2O35595 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptch2O35595 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ptch2O35595 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptch2O35595 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptch2O35595 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptch2O35595 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ptch2O35595 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ptch2O35595 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ptch2O35595 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ptch2O35595 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ptch2O35595 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ptch2O35595 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms