Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf11aO35305 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.36■□□□□ 0.37
Tnfrsf11aO35305 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf11aO35305 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf11aO35305 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf11aO35305 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tnfrsf11aO35305 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.35■□□□□ 0.37
Tnfrsf11aO35305 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf11aO35305 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.35■□□□□ 0.37
Tnfrsf11aO35305 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf11aO35305 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf11aO35305 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.35■□□□□ 0.37
Tnfrsf11aO35305 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf11aO35305 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.35■□□□□ 0.37
Tnfrsf11aO35305 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf11aO35305 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf11aO35305 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf11aO35305 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf11aO35305 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf11aO35305 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf11aO35305 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf11aO35305 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf11aO35305 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Tnfrsf11aO35305 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf11aO35305 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf11aO35305 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfrsf11aO35305 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.35■□□□□ 0.37
Tnfrsf11aO35305 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Tnfrsf11aO35305 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf11aO35305 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Tnfrsf11aO35305 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf11aO35305 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf11aO35305 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf11aO35305 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf11aO35305 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf11aO35305 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.34■□□□□ 0.37
Tnfrsf11aO35305 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Tnfrsf11aO35305 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.34■□□□□ 0.37
Tnfrsf11aO35305 Gm17807-201ENSMUST00000186869 298 ntBASIC17.34■□□□□ 0.37
Tnfrsf11aO35305 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.34■□□□□ 0.37
Tnfrsf11aO35305 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf11aO35305 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf11aO35305 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf11aO35305 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Tnfrsf11aO35305 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf11aO35305 Gm10819-201ENSMUST00000099988 561 ntBASIC17.34■□□□□ 0.37
Tnfrsf11aO35305 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfrsf11aO35305 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Tnfrsf11aO35305 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfrsf11aO35305 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfrsf11aO35305 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Tnfrsf11aO35305 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.33■□□□□ 0.37
Tnfrsf11aO35305 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfrsf11aO35305 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf11aO35305 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Tnfrsf11aO35305 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Tnfrsf11aO35305 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.33■□□□□ 0.36
Tnfrsf11aO35305 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf11aO35305 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.33■□□□□ 0.36
Tnfrsf11aO35305 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.33■□□□□ 0.36
Tnfrsf11aO35305 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf11aO35305 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf11aO35305 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf11aO35305 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf11aO35305 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf11aO35305 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf11aO35305 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf11aO35305 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Tnfrsf11aO35305 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf11aO35305 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf11aO35305 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.33■□□□□ 0.36
Tnfrsf11aO35305 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf11aO35305 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf11aO35305 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf11aO35305 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.33■□□□□ 0.36
Tnfrsf11aO35305 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11aO35305 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11aO35305 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11aO35305 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.32■□□□□ 0.36
Tnfrsf11aO35305 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11aO35305 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11aO35305 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11aO35305 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tnfrsf11aO35305 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11aO35305 Mir6404-201ENSMUST00000183699 94 ntBASIC17.32■□□□□ 0.36
Tnfrsf11aO35305 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.32■□□□□ 0.36
Tnfrsf11aO35305 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11aO35305 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11aO35305 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11aO35305 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11aO35305 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11aO35305 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11aO35305 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11aO35305 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11aO35305 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.32■□□□□ 0.36
Tnfrsf11aO35305 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11aO35305 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11aO35305 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11aO35305 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11aO35305 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms