Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col15a1O35206 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col15a1O35206 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col15a1O35206 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col15a1O35206 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Col15a1O35206 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col15a1O35206 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
Col15a1O35206 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Col15a1O35206 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.57■□□□□ 0.88
Col15a1O35206 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col15a1O35206 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col15a1O35206 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col15a1O35206 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.57■□□□□ 0.88
Col15a1O35206 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col15a1O35206 Gm17271-201ENSMUST00000165535 355 ntBASIC20.57■□□□□ 0.88
Col15a1O35206 Gm45747-201ENSMUST00000212203 999 ntBASIC20.57■□□□□ 0.88
Col15a1O35206 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC20.57■□□□□ 0.88
Col15a1O35206 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Col15a1O35206 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col15a1O35206 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col15a1O35206 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col15a1O35206 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC20.56■□□□□ 0.88
Col15a1O35206 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.56■□□□□ 0.88
Col15a1O35206 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col15a1O35206 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col15a1O35206 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col15a1O35206 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col15a1O35206 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Col15a1O35206 Gm13294-201ENSMUST00000121757 1330 ntBASIC20.56■□□□□ 0.88
Col15a1O35206 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col15a1O35206 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col15a1O35206 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col15a1O35206 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col15a1O35206 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
Col15a1O35206 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Col15a1O35206 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col15a1O35206 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col15a1O35206 Gm5366-201ENSMUST00000215494 1338 ntBASIC20.55■□□□□ 0.88
Col15a1O35206 Gm12892-201ENSMUST00000117367 1146 ntBASIC20.55■□□□□ 0.88
Col15a1O35206 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col15a1O35206 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC20.55■□□□□ 0.88
Col15a1O35206 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Col15a1O35206 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col15a1O35206 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Col15a1O35206 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col15a1O35206 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Col15a1O35206 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col15a1O35206 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col15a1O35206 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Col15a1O35206 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col15a1O35206 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC20.54■□□□□ 0.88
Col15a1O35206 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Col15a1O35206 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC20.54■□□□□ 0.88
Col15a1O35206 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC20.54■□□□□ 0.88
Col15a1O35206 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC20.54■□□□□ 0.88
Col15a1O35206 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC20.54■□□□□ 0.88
Col15a1O35206 AC122024.2-201ENSMUST00000220086 871 ntBASIC20.54■□□□□ 0.88
Col15a1O35206 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Col15a1O35206 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col15a1O35206 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col15a1O35206 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col15a1O35206 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Col15a1O35206 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Col15a1O35206 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.54■□□□□ 0.88
Col15a1O35206 Wnt10b-206ENSMUST00000228546 2709 ntBASIC20.53■□□□□ 0.88
Col15a1O35206 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col15a1O35206 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col15a1O35206 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Col15a1O35206 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col15a1O35206 Gm6257-201ENSMUST00000163864 910 ntBASIC20.53■□□□□ 0.88
Col15a1O35206 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col15a1O35206 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col15a1O35206 Gm19164-201ENSMUST00000210667 640 ntBASIC20.53■□□□□ 0.88
Col15a1O35206 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
Col15a1O35206 AC158982.1-201ENSMUST00000228377 901 ntBASIC20.53■□□□□ 0.88
Col15a1O35206 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col15a1O35206 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC20.53■□□□□ 0.88
Col15a1O35206 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Col15a1O35206 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col15a1O35206 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col15a1O35206 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col15a1O35206 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col15a1O35206 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col15a1O35206 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col15a1O35206 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col15a1O35206 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Col15a1O35206 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col15a1O35206 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col15a1O35206 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col15a1O35206 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col15a1O35206 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col15a1O35206 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
Col15a1O35206 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col15a1O35206 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Col15a1O35206 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col15a1O35206 Gm5177-201ENSMUST00000183092 997 ntBASIC20.52■□□□□ 0.88
Col15a1O35206 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC20.52■□□□□ 0.88
Col15a1O35206 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC20.52■□□□□ 0.88
Col15a1O35206 Gm7787-201ENSMUST00000216858 688 ntBASIC20.52■□□□□ 0.88
Col15a1O35206 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms