Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndufb11O09111 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Ndufb11O09111 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ndufb11O09111 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndufb11O09111 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndufb11O09111 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ndufb11O09111 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndufb11O09111 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndufb11O09111 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ndufb11O09111 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ndufb11O09111 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ndufb11O09111 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13□□□□□ -0.33
Ndufb11O09111 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ndufb11O09111 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndufb11O09111 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndufb11O09111 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndufb11O09111 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13□□□□□ -0.33
Ndufb11O09111 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndufb11O09111 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ndufb11O09111 Gm42501-201ENSMUST00000200220 1026 ntBASIC13□□□□□ -0.33
Ndufb11O09111 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ndufb11O09111 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndufb11O09111 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ndufb11O09111 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13□□□□□ -0.33
Ndufb11O09111 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ndufb11O09111 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13□□□□□ -0.33
Ndufb11O09111 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ndufb11O09111 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13□□□□□ -0.33
Ndufb11O09111 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13□□□□□ -0.33
Ndufb11O09111 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ndufb11O09111 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ndufb11O09111 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ndufb11O09111 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Ndufb11O09111 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ndufb11O09111 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndufb11O09111 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.98□□□□□ -0.33
Ndufb11O09111 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ndufb11O09111 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ndufb11O09111 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.98□□□□□ -0.33
Ndufb11O09111 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndufb11O09111 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ndufb11O09111 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.98□□□□□ -0.33
Ndufb11O09111 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndufb11O09111 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC12.98□□□□□ -0.33
Ndufb11O09111 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndufb11O09111 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ndufb11O09111 Gm10129-202ENSMUST00000193100 1316 ntBASIC12.98□□□□□ -0.33
Ndufb11O09111 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndufb11O09111 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ndufb11O09111 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndufb11O09111 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.98□□□□□ -0.33
Ndufb11O09111 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndufb11O09111 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC12.98□□□□□ -0.33
Ndufb11O09111 Gm13146-201ENSMUST00000118508 780 ntBASIC12.98□□□□□ -0.33
Ndufb11O09111 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.98□□□□□ -0.33
Ndufb11O09111 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC12.98□□□□□ -0.33
Ndufb11O09111 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndufb11O09111 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ndufb11O09111 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndufb11O09111 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Ndufb11O09111 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ndufb11O09111 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndufb11O09111 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndufb11O09111 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndufb11O09111 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndufb11O09111 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndufb11O09111 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndufb11O09111 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndufb11O09111 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ndufb11O09111 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndufb11O09111 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ndufb11O09111 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndufb11O09111 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ndufb11O09111 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndufb11O09111 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ndufb11O09111 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms