Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac1O09106 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac1O09106 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Hdac1O09106 AC154412.1-201ENSMUST00000226540 2786 ntBASIC19.21■□□□□ 0.67
Hdac1O09106 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac1O09106 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac1O09106 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Hdac1O09106 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac1O09106 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
Hdac1O09106 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Hdac1O09106 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.21■□□□□ 0.67
Hdac1O09106 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Hdac1O09106 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac1O09106 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Hdac1O09106 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac1O09106 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Hdac1O09106 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac1O09106 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac1O09106 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hdac1O09106 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.2■□□□□ 0.66
Hdac1O09106 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Hdac1O09106 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac1O09106 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Hdac1O09106 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac1O09106 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac1O09106 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Hdac1O09106 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac1O09106 Gm15039-201ENSMUST00000118914 875 ntBASIC19.2■□□□□ 0.66
Hdac1O09106 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.2■□□□□ 0.66
Hdac1O09106 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac1O09106 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac1O09106 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.2■□□□□ 0.66
Hdac1O09106 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac1O09106 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac1O09106 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac1O09106 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.2■□□□□ 0.66
Hdac1O09106 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac1O09106 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC19.2■□□□□ 0.66
Hdac1O09106 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac1O09106 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.2■□□□□ 0.66
Hdac1O09106 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac1O09106 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac1O09106 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac1O09106 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac1O09106 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac1O09106 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac1O09106 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac1O09106 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac1O09106 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac1O09106 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Hdac1O09106 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.19■□□□□ 0.66
Hdac1O09106 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac1O09106 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac1O09106 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac1O09106 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac1O09106 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac1O09106 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac1O09106 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac1O09106 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Hdac1O09106 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac1O09106 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac1O09106 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac1O09106 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac1O09106 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac1O09106 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac1O09106 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac1O09106 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac1O09106 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.18■□□□□ 0.66
Hdac1O09106 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac1O09106 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac1O09106 Mir1668-201ENSMUST00000184114 107 ntBASIC19.18■□□□□ 0.66
Hdac1O09106 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.18■□□□□ 0.66
Hdac1O09106 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.18■□□□□ 0.66
Hdac1O09106 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac1O09106 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac1O09106 Gm5417-201ENSMUST00000079706 384 ntBASIC19.18■□□□□ 0.66
Hdac1O09106 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac1O09106 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac1O09106 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac1O09106 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac1O09106 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac1O09106 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac1O09106 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac1O09106 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Hdac1O09106 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac1O09106 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac1O09106 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac1O09106 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac1O09106 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac1O09106 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Hdac1O09106 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac1O09106 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Hdac1O09106 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.17■□□□□ 0.66
Hdac1O09106 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.17■□□□□ 0.66
Hdac1O09106 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac1O09106 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac1O09106 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac1O09106 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac1O09106 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac1O09106 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms