Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2b3O09039 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2b3O09039 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Sh2b3O09039 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.35□□□□□ -0.11
Sh2b3O09039 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2b3O09039 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2b3O09039 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2b3O09039 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.34□□□□□ -0.11
Sh2b3O09039 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2b3O09039 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2b3O09039 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2b3O09039 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.34□□□□□ -0.11
Sh2b3O09039 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sh2b3O09039 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
Sh2b3O09039 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2b3O09039 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Sh2b3O09039 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2b3O09039 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2b3O09039 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2b3O09039 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2b3O09039 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2b3O09039 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2b3O09039 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.34□□□□□ -0.11
Sh2b3O09039 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2b3O09039 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2b3O09039 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2b3O09039 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2b3O09039 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2b3O09039 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2b3O09039 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2b3O09039 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sh2b3O09039 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2b3O09039 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2b3O09039 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sh2b3O09039 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2b3O09039 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Sh2b3O09039 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sh2b3O09039 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
Sh2b3O09039 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Sh2b3O09039 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
Sh2b3O09039 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh2b3O09039 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sh2b3O09039 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.33□□□□□ -0.12
Sh2b3O09039 Mir8098-201ENSMUST00000184011 137 ntBASIC14.33□□□□□ -0.12
Sh2b3O09039 Gm27459-201ENSMUST00000184860 107 ntBASIC14.33□□□□□ -0.12
Sh2b3O09039 Gm5864-201ENSMUST00000202263 970 ntBASIC14.33□□□□□ -0.12
Sh2b3O09039 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.33□□□□□ -0.12
Sh2b3O09039 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.33□□□□□ -0.12
Sh2b3O09039 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.33□□□□□ -0.12
Sh2b3O09039 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.33□□□□□ -0.12
Sh2b3O09039 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh2b3O09039 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Sh2b3O09039 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh2b3O09039 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sh2b3O09039 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh2b3O09039 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh2b3O09039 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.32□□□□□ -0.12
Sh2b3O09039 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sh2b3O09039 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2b3O09039 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2b3O09039 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2b3O09039 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.32□□□□□ -0.12
Sh2b3O09039 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2b3O09039 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2b3O09039 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.32□□□□□ -0.12
Sh2b3O09039 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2b3O09039 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.32□□□□□ -0.12
Sh2b3O09039 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sh2b3O09039 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2b3O09039 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.32□□□□□ -0.12
Sh2b3O09039 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2b3O09039 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2b3O09039 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.32□□□□□ -0.12
Sh2b3O09039 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.32□□□□□ -0.12
Sh2b3O09039 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2b3O09039 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2b3O09039 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2b3O09039 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Sh2b3O09039 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.32□□□□□ -0.12
Sh2b3O09039 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2b3O09039 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sh2b3O09039 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.32□□□□□ -0.12
Sh2b3O09039 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2b3O09039 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2b3O09039 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.31□□□□□ -0.12
Sh2b3O09039 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh2b3O09039 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh2b3O09039 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh2b3O09039 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh2b3O09039 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Sh2b3O09039 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sh2b3O09039 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sh2b3O09039 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Sh2b3O09039 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh2b3O09039 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Sh2b3O09039 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.31□□□□□ -0.12
Sh2b3O09039 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh2b3O09039 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sh2b3O09039 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sh2b3O09039 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms