Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm45328-201ENSMUST00000210942 917 ntBASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav13d-3J3QMG8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Trav13d-3J3QMG8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav13d-3J3QMG8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-3J3QMG8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.18□□□□□ -0.14
Trav13d-3J3QMG8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Trav13d-3J3QMG8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-3J3QMG8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav13d-3J3QMG8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.18□□□□□ -0.14
Trav13d-3J3QMG8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-3J3QMG8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.18□□□□□ -0.14
Trav13d-3J3QMG8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Trav13d-3J3QMG8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-3J3QMG8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-3J3QMG8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-3J3QMG8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-3J3QMG8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-3J3QMG8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-3J3QMG8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav13d-3J3QMG8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-3J3QMG8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-3J3QMG8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-3J3QMG8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-3J3QMG8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13d-3J3QMG8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Trav13d-3J3QMG8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-3J3QMG8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-3J3QMG8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-3J3QMG8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-3J3QMG8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-3J3QMG8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav13d-3J3QMG8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-3J3QMG8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trav13d-3J3QMG8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav13d-3J3QMG8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-3J3QMG8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-3J3QMG8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-3J3QMG8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Trav13d-3J3QMG8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-3J3QMG8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-3J3QMG8 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.17□□□□□ -0.14
Trav13d-3J3QMG8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-3J3QMG8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-3J3QMG8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-3J3QMG8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-3J3QMG8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-3J3QMG8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13d-3J3QMG8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-3J3QMG8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-3J3QMG8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13d-3J3QMG8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav13d-3J3QMG8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms