Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Trim55G3X8Y1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim55G3X8Y1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim55G3X8Y1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim55G3X8Y1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim55G3X8Y1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.65■□□□□ 0.26
Trim55G3X8Y1 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim55G3X8Y1 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim55G3X8Y1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim55G3X8Y1 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim55G3X8Y1 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim55G3X8Y1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.65■□□□□ 0.26
Trim55G3X8Y1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim55G3X8Y1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim55G3X8Y1 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim55G3X8Y1 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim55G3X8Y1 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Trim55G3X8Y1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trim55G3X8Y1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trim55G3X8Y1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Gm10418-201ENSMUST00000100943 576 ntBASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim55G3X8Y1 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim55G3X8Y1 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim55G3X8Y1 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim55G3X8Y1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim55G3X8Y1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim55G3X8Y1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim55G3X8Y1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim55G3X8Y1 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim55G3X8Y1 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim55G3X8Y1 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim55G3X8Y1 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.63■□□□□ 0.25
Trim55G3X8Y1 Gm42778-201ENSMUST00000199644 553 ntBASIC16.63■□□□□ 0.25
Trim55G3X8Y1 AV356131-201ENSMUST00000206201 750 ntBASIC16.63■□□□□ 0.25
Trim55G3X8Y1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim55G3X8Y1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim55G3X8Y1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim55G3X8Y1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim55G3X8Y1 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
Trim55G3X8Y1 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim55G3X8Y1 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim55G3X8Y1 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim55G3X8Y1 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Gm13534-201ENSMUST00000121169 513 ntBASIC16.62■□□□□ 0.25
Trim55G3X8Y1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim55G3X8Y1 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms