Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NpcdF8VQB8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
NpcdF8VQB8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NpcdF8VQB8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NpcdF8VQB8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NpcdF8VQB8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
NpcdF8VQB8 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NpcdF8VQB8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NpcdF8VQB8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NpcdF8VQB8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NpcdF8VQB8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
NpcdF8VQB8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
NpcdF8VQB8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NpcdF8VQB8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NpcdF8VQB8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC19.33■□□□□ 0.68
NpcdF8VQB8 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NpcdF8VQB8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.33■□□□□ 0.68
NpcdF8VQB8 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC19.33■□□□□ 0.68
NpcdF8VQB8 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NpcdF8VQB8 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC19.33■□□□□ 0.68
NpcdF8VQB8 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NpcdF8VQB8 Mir7023-201ENSMUST00000185093 64 ntBASIC19.33■□□□□ 0.68
NpcdF8VQB8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC19.33■□□□□ 0.68
NpcdF8VQB8 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC19.33■□□□□ 0.68
NpcdF8VQB8 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NpcdF8VQB8 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC19.33■□□□□ 0.68
NpcdF8VQB8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NpcdF8VQB8 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NpcdF8VQB8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NpcdF8VQB8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
NpcdF8VQB8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NpcdF8VQB8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NpcdF8VQB8 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NpcdF8VQB8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NpcdF8VQB8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NpcdF8VQB8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NpcdF8VQB8 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC19.32■□□□□ 0.68
NpcdF8VQB8 Gm25406-201ENSMUST00000157599 105 ntBASIC19.32■□□□□ 0.68
NpcdF8VQB8 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
NpcdF8VQB8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC19.32■□□□□ 0.68
NpcdF8VQB8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC19.32■□□□□ 0.68
NpcdF8VQB8 Gm27494-201ENSMUST00000184735 189 ntBASIC19.32■□□□□ 0.68
NpcdF8VQB8 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NpcdF8VQB8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NpcdF8VQB8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NpcdF8VQB8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NpcdF8VQB8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NpcdF8VQB8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NpcdF8VQB8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NpcdF8VQB8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NpcdF8VQB8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NpcdF8VQB8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NpcdF8VQB8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NpcdF8VQB8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NpcdF8VQB8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
NpcdF8VQB8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC19.31■□□□□ 0.68
NpcdF8VQB8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NpcdF8VQB8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NpcdF8VQB8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NpcdF8VQB8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NpcdF8VQB8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NpcdF8VQB8 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NpcdF8VQB8 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.31■□□□□ 0.68
NpcdF8VQB8 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NpcdF8VQB8 Gm5745-201ENSMUST00000183748 313 ntBASIC19.31■□□□□ 0.68
NpcdF8VQB8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NpcdF8VQB8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NpcdF8VQB8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NpcdF8VQB8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NpcdF8VQB8 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NpcdF8VQB8 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NpcdF8VQB8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NpcdF8VQB8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NpcdF8VQB8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NpcdF8VQB8 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.3■□□□□ 0.68
NpcdF8VQB8 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC19.3■□□□□ 0.68
NpcdF8VQB8 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC19.3■□□□□ 0.68
NpcdF8VQB8 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NpcdF8VQB8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NpcdF8VQB8 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NpcdF8VQB8 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NpcdF8VQB8 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.3■□□□□ 0.68
NpcdF8VQB8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NpcdF8VQB8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NpcdF8VQB8 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NpcdF8VQB8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NpcdF8VQB8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NpcdF8VQB8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NpcdF8VQB8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NpcdF8VQB8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.3■□□□□ 0.68
NpcdF8VQB8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NpcdF8VQB8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NpcdF8VQB8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NpcdF8VQB8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NpcdF8VQB8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NpcdF8VQB8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.29■□□□□ 0.68
NpcdF8VQB8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.29■□□□□ 0.68
NpcdF8VQB8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NpcdF8VQB8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NpcdF8VQB8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms