Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc188F6WEU2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc188F6WEU2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc188F6WEU2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc188F6WEU2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc188F6WEU2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc188F6WEU2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc188F6WEU2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc188F6WEU2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc188F6WEU2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc188F6WEU2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc188F6WEU2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc188F6WEU2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc188F6WEU2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc188F6WEU2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc188F6WEU2 Gm43630-201ENSMUST00000201550 776 ntBASIC16.26■□□□□ 0.19
Ccdc188F6WEU2 Gm18057-201ENSMUST00000208220 503 ntBASIC16.26■□□□□ 0.19
Ccdc188F6WEU2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.26■□□□□ 0.19
Ccdc188F6WEU2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ccdc188F6WEU2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc188F6WEU2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc188F6WEU2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.26■□□□□ 0.19
Ccdc188F6WEU2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Ccdc188F6WEU2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc188F6WEU2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc188F6WEU2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc188F6WEU2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc188F6WEU2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.25■□□□□ 0.19
Ccdc188F6WEU2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc188F6WEU2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.25■□□□□ 0.19
Ccdc188F6WEU2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc188F6WEU2 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.25■□□□□ 0.19
Ccdc188F6WEU2 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.25■□□□□ 0.19
Ccdc188F6WEU2 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.25■□□□□ 0.19
Ccdc188F6WEU2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc188F6WEU2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc188F6WEU2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc188F6WEU2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc188F6WEU2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc188F6WEU2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc188F6WEU2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.24■□□□□ 0.19
Ccdc188F6WEU2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.24■□□□□ 0.19
Ccdc188F6WEU2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc188F6WEU2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc188F6WEU2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc188F6WEU2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc188F6WEU2 Iqck-206ENSMUST00000208658 2891 ntBASIC16.24■□□□□ 0.19
Ccdc188F6WEU2 Gm6415-201ENSMUST00000118488 348 ntBASIC16.24■□□□□ 0.19
Ccdc188F6WEU2 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.24■□□□□ 0.19
Ccdc188F6WEU2 Gm18489-201ENSMUST00000172565 551 ntBASIC16.24■□□□□ 0.19
Ccdc188F6WEU2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.24■□□□□ 0.19
Ccdc188F6WEU2 Gm6888-201ENSMUST00000221983 706 ntBASIC16.24■□□□□ 0.19
Ccdc188F6WEU2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc188F6WEU2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc188F6WEU2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc188F6WEU2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc188F6WEU2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc188F6WEU2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc188F6WEU2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc188F6WEU2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc188F6WEU2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc188F6WEU2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 Gm15358-201ENSMUST00000119249 520 ntBASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 Gm18062-201ENSMUST00000208020 547 ntBASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 Gm18055-201ENSMUST00000208254 547 ntBASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc188F6WEU2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Gm25287-201ENSMUST00000103846 110 ntBASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Gm22918-201ENSMUST00000103855 110 ntBASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Gm15693-201ENSMUST00000120470 637 ntBASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Gm15487-201ENSMUST00000122373 465 ntBASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.22■□□□□ 0.19
Ccdc188F6WEU2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms