Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ube4aE9Q735 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ube4aE9Q735 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ube4aE9Q735 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ube4aE9Q735 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Ube4aE9Q735 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC19.33■□□□□ 0.68
Ube4aE9Q735 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC19.33■□□□□ 0.68
Ube4aE9Q735 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ube4aE9Q735 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Ube4aE9Q735 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC19.33■□□□□ 0.68
Ube4aE9Q735 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ube4aE9Q735 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ube4aE9Q735 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ube4aE9Q735 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ube4aE9Q735 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ube4aE9Q735 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ube4aE9Q735 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ube4aE9Q735 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ube4aE9Q735 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4aE9Q735 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4aE9Q735 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4aE9Q735 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4aE9Q735 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4aE9Q735 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4aE9Q735 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4aE9Q735 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4aE9Q735 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4aE9Q735 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC19.32■□□□□ 0.68
Ube4aE9Q735 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4aE9Q735 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Ube4aE9Q735 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4aE9Q735 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC19.32■□□□□ 0.68
Ube4aE9Q735 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4aE9Q735 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4aE9Q735 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4aE9Q735 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC19.32■□□□□ 0.68
Ube4aE9Q735 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ube4aE9Q735 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4aE9Q735 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4aE9Q735 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ube4aE9Q735 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4aE9Q735 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4aE9Q735 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.32■□□□□ 0.68
Ube4aE9Q735 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4aE9Q735 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4aE9Q735 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ube4aE9Q735 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ube4aE9Q735 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Ube4aE9Q735 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ube4aE9Q735 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ube4aE9Q735 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ube4aE9Q735 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ube4aE9Q735 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC19.31■□□□□ 0.68
Ube4aE9Q735 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ube4aE9Q735 Gm45683-201ENSMUST00000210825 1247 ntBASIC19.31■□□□□ 0.68
Ube4aE9Q735 CT943659.1-201ENSMUST00000215459 326 ntBASIC19.31■□□□□ 0.68
Ube4aE9Q735 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC19.31■□□□□ 0.68
Ube4aE9Q735 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ube4aE9Q735 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ube4aE9Q735 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ube4aE9Q735 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ube4aE9Q735 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ube4aE9Q735 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ube4aE9Q735 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube4aE9Q735 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.3■□□□□ 0.68
Ube4aE9Q735 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube4aE9Q735 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ube4aE9Q735 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.3■□□□□ 0.68
Ube4aE9Q735 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ube4aE9Q735 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.3■□□□□ 0.68
Ube4aE9Q735 Gm15358-201ENSMUST00000119249 520 ntBASIC19.3■□□□□ 0.68
Ube4aE9Q735 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC19.3■□□□□ 0.68
Ube4aE9Q735 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.3■□□□□ 0.68
Ube4aE9Q735 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ube4aE9Q735 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.3■□□□□ 0.68
Ube4aE9Q735 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ube4aE9Q735 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4aE9Q735 AC090659.1-201ENSMUST00000224334 768 ntBASIC19.29■□□□□ 0.68
Ube4aE9Q735 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4aE9Q735 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.29■□□□□ 0.68
Ube4aE9Q735 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ube4aE9Q735 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms