Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Herc1E9PZP8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Herc1E9PZP8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Herc1E9PZP8 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Herc1E9PZP8 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Herc1E9PZP8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC8.99□□□□□ -0.97
Herc1E9PZP8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Herc1E9PZP8 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Herc1E9PZP8 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Herc1E9PZP8 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Herc1E9PZP8 Gm15358-201ENSMUST00000119249 520 ntBASIC8.99□□□□□ -0.97
Herc1E9PZP8 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Herc1E9PZP8 Gm24514-201ENSMUST00000174961 285 ntBASIC8.99□□□□□ -0.97
Herc1E9PZP8 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC8.99□□□□□ -0.97
Herc1E9PZP8 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Herc1E9PZP8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Herc1E9PZP8 Gm8344-201ENSMUST00000119813 856 ntBASIC8.99□□□□□ -0.97
Herc1E9PZP8 Gm7584-201ENSMUST00000175829 940 ntBASIC8.99□□□□□ -0.97
Herc1E9PZP8 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Herc1E9PZP8 Ldb3-207ENSMUST00000227819 1499 ntBASIC8.99□□□□□ -0.97
Herc1E9PZP8 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Herc1E9PZP8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Herc1E9PZP8 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Herc1E9PZP8 Gm18489-201ENSMUST00000172565 551 ntBASIC8.99□□□□□ -0.97
Herc1E9PZP8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Herc1E9PZP8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Herc1E9PZP8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Herc1E9PZP8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Herc1E9PZP8 Gm45203-201ENSMUST00000206384 1831 ntBASIC8.98□□□□□ -0.97
Herc1E9PZP8 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC8.98□□□□□ -0.97
Herc1E9PZP8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Herc1E9PZP8 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Herc1E9PZP8 Gm14263-201ENSMUST00000117955 746 ntBASIC8.98□□□□□ -0.97
Herc1E9PZP8 Gm13350-201ENSMUST00000120519 479 ntBASIC8.98□□□□□ -0.97
Herc1E9PZP8 Gm43272-201ENSMUST00000200599 1584 ntBASIC8.98□□□□□ -0.97
Herc1E9PZP8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Herc1E9PZP8 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC8.98□□□□□ -0.97
Herc1E9PZP8 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Herc1E9PZP8 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Herc1E9PZP8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
Herc1E9PZP8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Herc1E9PZP8 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
Herc1E9PZP8 Gm12960-201ENSMUST00000120017 1066 ntBASIC8.98□□□□□ -0.97
Herc1E9PZP8 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Herc1E9PZP8 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC8.98□□□□□ -0.97
Herc1E9PZP8 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC8.98□□□□□ -0.97
Herc1E9PZP8 AC124603.1-201ENSMUST00000223843 308 ntBASIC8.98□□□□□ -0.97
Herc1E9PZP8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC8.98□□□□□ -0.97
Herc1E9PZP8 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC8.98□□□□□ -0.97
Herc1E9PZP8 AC132317.1-201ENSMUST00000227227 962 ntBASIC8.98□□□□□ -0.97
Herc1E9PZP8 AC114585.2-202ENSMUST00000228094 426 ntBASIC8.98□□□□□ -0.97
Herc1E9PZP8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Herc1E9PZP8 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Herc1E9PZP8 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Herc1E9PZP8 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC8.97□□□□□ -0.97
Herc1E9PZP8 Gm4857-201ENSMUST00000192718 785 ntBASIC8.97□□□□□ -0.97
Herc1E9PZP8 AC238811.1-201ENSMUST00000225302 441 ntBASIC8.97□□□□□ -0.97
Herc1E9PZP8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Gm8116-201ENSMUST00000182917 1201 ntBASIC8.97□□□□□ -0.97
Herc1E9PZP8 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
Herc1E9PZP8 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Gm6316-201ENSMUST00000082064 1020 ntBASIC8.97□□□□□ -0.97
Herc1E9PZP8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Gm29361-201ENSMUST00000183323 2000 ntBASIC8.97□□□□□ -0.97
Herc1E9PZP8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Herc1E9PZP8 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC8.97□□□□□ -0.97
Herc1E9PZP8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC8.97□□□□□ -0.97
Herc1E9PZP8 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms