Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Srp54bE9PXC0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Srp54bE9PXC0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Srp54bE9PXC0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Srp54bE9PXC0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Srp54bE9PXC0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Srp54bE9PXC0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Srp54bE9PXC0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.84■□□□□ 0.13
Srp54bE9PXC0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.84■□□□□ 0.13
Srp54bE9PXC0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Srp54bE9PXC0 Gm8097-201ENSMUST00000117903 829 ntBASIC15.84■□□□□ 0.13
Srp54bE9PXC0 Gm25406-201ENSMUST00000157599 105 ntBASIC15.84■□□□□ 0.13
Srp54bE9PXC0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Srp54bE9PXC0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.84■□□□□ 0.13
Srp54bE9PXC0 Gm7230-201ENSMUST00000173026 815 ntBASIC15.84■□□□□ 0.13
Srp54bE9PXC0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
Srp54bE9PXC0 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.84■□□□□ 0.13
Srp54bE9PXC0 Gm8655-201ENSMUST00000221159 852 ntBASIC15.84■□□□□ 0.13
Srp54bE9PXC0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Srp54bE9PXC0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Srp54bE9PXC0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Srp54bE9PXC0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.84■□□□□ 0.13
Srp54bE9PXC0 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.84■□□□□ 0.13
Srp54bE9PXC0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Srp54bE9PXC0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Srp54bE9PXC0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Srp54bE9PXC0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Srp54bE9PXC0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Srp54bE9PXC0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Srp54bE9PXC0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Srp54bE9PXC0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Srp54bE9PXC0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Srp54bE9PXC0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.83■□□□□ 0.12
Srp54bE9PXC0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Srp54bE9PXC0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Srp54bE9PXC0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.83■□□□□ 0.12
Srp54bE9PXC0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Srp54bE9PXC0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Srp54bE9PXC0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Srp54bE9PXC0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Srp54bE9PXC0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Srp54bE9PXC0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Srp54bE9PXC0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Srp54bE9PXC0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Srp54bE9PXC0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Srp54bE9PXC0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Srp54bE9PXC0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Gm15173-201ENSMUST00000122049 433 ntBASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Mir5126-201ENSMUST00000175513 77 ntBASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Srp54bE9PXC0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.81■□□□□ 0.12
Srp54bE9PXC0 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms