Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shank1D3YZU1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Shank1D3YZU1 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shank1D3YZU1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shank1D3YZU1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shank1D3YZU1 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shank1D3YZU1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shank1D3YZU1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shank1D3YZU1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shank1D3YZU1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shank1D3YZU1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shank1D3YZU1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shank1D3YZU1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shank1D3YZU1 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shank1D3YZU1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shank1D3YZU1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Shank1D3YZU1 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.4□□□□□ -0.1
Shank1D3YZU1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.4□□□□□ -0.1
Shank1D3YZU1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Shank1D3YZU1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Shank1D3YZU1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shank1D3YZU1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Gm14057-201ENSMUST00000120631 482 ntBASIC14.39□□□□□ -0.11
Shank1D3YZU1 Gm11025-201ENSMUST00000140773 466 ntBASIC14.39□□□□□ -0.11
Shank1D3YZU1 Gm44872-201ENSMUST00000207864 420 ntBASIC14.39□□□□□ -0.11
Shank1D3YZU1 Gm8655-201ENSMUST00000221159 852 ntBASIC14.39□□□□□ -0.11
Shank1D3YZU1 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.39□□□□□ -0.11
Shank1D3YZU1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shank1D3YZU1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shank1D3YZU1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Shank1D3YZU1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shank1D3YZU1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.38□□□□□ -0.11
Shank1D3YZU1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Shank1D3YZU1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shank1D3YZU1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shank1D3YZU1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shank1D3YZU1 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Shank1D3YZU1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.38□□□□□ -0.11
Shank1D3YZU1 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.38□□□□□ -0.11
Shank1D3YZU1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shank1D3YZU1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Shank1D3YZU1 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shank1D3YZU1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shank1D3YZU1 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shank1D3YZU1 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shank1D3YZU1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shank1D3YZU1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shank1D3YZU1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Shank1D3YZU1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shank1D3YZU1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shank1D3YZU1 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.37□□□□□ -0.11
Shank1D3YZU1 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Shank1D3YZU1 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.37□□□□□ -0.11
Shank1D3YZU1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.37□□□□□ -0.11
Shank1D3YZU1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shank1D3YZU1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.37□□□□□ -0.11
Shank1D3YZU1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.37□□□□□ -0.11
Shank1D3YZU1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Shank1D3YZU1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms