Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx8D3YU81 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rfx8D3YU81 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx8D3YU81 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx8D3YU81 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rfx8D3YU81 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx8D3YU81 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx8D3YU81 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx8D3YU81 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx8D3YU81 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx8D3YU81 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx8D3YU81 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx8D3YU81 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx8D3YU81 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx8D3YU81 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx8D3YU81 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rfx8D3YU81 Gm27704-201ENSMUST00000185094 107 ntBASIC17.09■□□□□ 0.33
Rfx8D3YU81 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.09■□□□□ 0.33
Rfx8D3YU81 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx8D3YU81 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx8D3YU81 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx8D3YU81 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rfx8D3YU81 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx8D3YU81 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.09■□□□□ 0.33
Rfx8D3YU81 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.09■□□□□ 0.33
Rfx8D3YU81 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx8D3YU81 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.09■□□□□ 0.33
Rfx8D3YU81 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx8D3YU81 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx8D3YU81 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx8D3YU81 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx8D3YU81 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx8D3YU81 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx8D3YU81 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx8D3YU81 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx8D3YU81 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx8D3YU81 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Rfx8D3YU81 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx8D3YU81 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Rfx8D3YU81 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx8D3YU81 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rfx8D3YU81 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx8D3YU81 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rfx8D3YU81 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx8D3YU81 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx8D3YU81 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx8D3YU81 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx8D3YU81 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx8D3YU81 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rfx8D3YU81 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx8D3YU81 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx8D3YU81 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx8D3YU81 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx8D3YU81 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx8D3YU81 Gm7284-201ENSMUST00000131667 944 ntBASIC17.07■□□□□ 0.32
Rfx8D3YU81 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx8D3YU81 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx8D3YU81 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.07■□□□□ 0.32
Rfx8D3YU81 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx8D3YU81 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx8D3YU81 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx8D3YU81 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx8D3YU81 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx8D3YU81 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Gm27742-201ENSMUST00000184667 60 ntBASIC17.06■□□□□ 0.32
Rfx8D3YU81 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.06■□□□□ 0.32
Rfx8D3YU81 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.06■□□□□ 0.32
Rfx8D3YU81 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx8D3YU81 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms