Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn7aB1AYL1 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC20.68■□□□□ 0.9
Scn7aB1AYL1 Gm13332-201ENSMUST00000120451 1398 ntBASIC20.68■□□□□ 0.9
Scn7aB1AYL1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn7aB1AYL1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn7aB1AYL1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scn7aB1AYL1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn7aB1AYL1 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn7aB1AYL1 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scn7aB1AYL1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn7aB1AYL1 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC20.67■□□□□ 0.9
Scn7aB1AYL1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC20.67■□□□□ 0.9
Scn7aB1AYL1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC20.67■□□□□ 0.9
Scn7aB1AYL1 Haglr-201ENSMUST00000100000 2085 ntBASIC20.67■□□□□ 0.9
Scn7aB1AYL1 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scn7aB1AYL1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn7aB1AYL1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn7aB1AYL1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn7aB1AYL1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scn7aB1AYL1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Scn7aB1AYL1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scn7aB1AYL1 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC20.67■□□□□ 0.9
Scn7aB1AYL1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn7aB1AYL1 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Scn7aB1AYL1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn7aB1AYL1 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn7aB1AYL1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn7aB1AYL1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn7aB1AYL1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn7aB1AYL1 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC20.66■□□□□ 0.9
Scn7aB1AYL1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn7aB1AYL1 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn7aB1AYL1 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scn7aB1AYL1 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn7aB1AYL1 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn7aB1AYL1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.66■□□□□ 0.9
Scn7aB1AYL1 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn7aB1AYL1 Gm12008-201ENSMUST00000117791 755 ntBASIC20.66■□□□□ 0.9
Scn7aB1AYL1 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC20.66■□□□□ 0.9
Scn7aB1AYL1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC20.66■□□□□ 0.9
Scn7aB1AYL1 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Scn7aB1AYL1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn7aB1AYL1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn7aB1AYL1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn7aB1AYL1 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn7aB1AYL1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scn7aB1AYL1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn7aB1AYL1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn7aB1AYL1 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Scn7aB1AYL1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn7aB1AYL1 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn7aB1AYL1 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC20.65■□□□□ 0.9
Scn7aB1AYL1 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn7aB1AYL1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn7aB1AYL1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn7aB1AYL1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn7aB1AYL1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn7aB1AYL1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Scn7aB1AYL1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn7aB1AYL1 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn7aB1AYL1 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scn7aB1AYL1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scn7aB1AYL1 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Scn7aB1AYL1 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Scn7aB1AYL1 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC20.64■□□□□ 0.9
Scn7aB1AYL1 AC159114.1-201ENSMUST00000220349 266 ntBASIC20.64■□□□□ 0.9
Scn7aB1AYL1 AC151836.1-202ENSMUST00000226259 753 ntBASIC20.64■□□□□ 0.9
Scn7aB1AYL1 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Scn7aB1AYL1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scn7aB1AYL1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Scn7aB1AYL1 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scn7aB1AYL1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Scn7aB1AYL1 Gm14701-201ENSMUST00000117156 348 ntBASIC20.64■□□□□ 0.89
Scn7aB1AYL1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC20.64■□□□□ 0.89
Scn7aB1AYL1 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scn7aB1AYL1 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Scn7aB1AYL1 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scn7aB1AYL1 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scn7aB1AYL1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Scn7aB1AYL1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.63■□□□□ 0.89
Scn7aB1AYL1 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn7aB1AYL1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn7aB1AYL1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn7aB1AYL1 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn7aB1AYL1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn7aB1AYL1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Scn7aB1AYL1 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC20.63■□□□□ 0.89
Scn7aB1AYL1 Gm27301-201ENSMUST00000184012 127 ntBASIC20.63■□□□□ 0.89
Scn7aB1AYL1 Gm10576-201ENSMUST00000191927 825 ntBASIC20.63■□□□□ 0.89
Scn7aB1AYL1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC20.63■□□□□ 0.89
Scn7aB1AYL1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn7aB1AYL1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scn7aB1AYL1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.63■□□□□ 0.89
Scn7aB1AYL1 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Scn7aB1AYL1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.63■□□□□ 0.89
Scn7aB1AYL1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Scn7aB1AYL1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scn7aB1AYL1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scn7aB1AYL1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scn7aB1AYL1 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms