Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.49■□□□□ 0.23
Col4a6B1AVK5 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a6B1AVK5 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.49■□□□□ 0.23
Col4a6B1AVK5 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Col4a6B1AVK5 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a6B1AVK5 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a6B1AVK5 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a6B1AVK5 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.49■□□□□ 0.23
Col4a6B1AVK5 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.49■□□□□ 0.23
Col4a6B1AVK5 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a6B1AVK5 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Col4a6B1AVK5 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.49■□□□□ 0.23
Col4a6B1AVK5 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.49■□□□□ 0.23
Col4a6B1AVK5 Thap2-203ENSMUST00000218989 527 ntBASIC16.49■□□□□ 0.23
Col4a6B1AVK5 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col4a6B1AVK5 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Col4a6B1AVK5 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.49■□□□□ 0.23
Col4a6B1AVK5 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a6B1AVK5 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a6B1AVK5 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a6B1AVK5 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a6B1AVK5 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a6B1AVK5 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a6B1AVK5 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a6B1AVK5 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a6B1AVK5 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Col4a6B1AVK5 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a6B1AVK5 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col4a6B1AVK5 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a6B1AVK5 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col4a6B1AVK5 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a6B1AVK5 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a6B1AVK5 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a6B1AVK5 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col4a6B1AVK5 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Col4a6B1AVK5 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a6B1AVK5 AA543401-201ENSMUST00000164248 1269 ntBASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Rpph1-201ENSMUST00000175096 319 ntBASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Gm27301-201ENSMUST00000184012 127 ntBASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Gm43474-201ENSMUST00000196415 774 ntBASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Col4a6B1AVK5 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Col4a6B1AVK5 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a6B1AVK5 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.46■□□□□ 0.23
Col4a6B1AVK5 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Col4a6B1AVK5 Gm25948-201ENSMUST00000175334 112 ntBASIC16.46■□□□□ 0.23
Col4a6B1AVK5 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a6B1AVK5 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a6B1AVK5 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a6B1AVK5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a6B1AVK5 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a6B1AVK5 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a6B1AVK5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a6B1AVK5 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a6B1AVK5 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a6B1AVK5 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a6B1AVK5 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.46■□□□□ 0.23
Col4a6B1AVK5 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a6B1AVK5 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Col4a6B1AVK5 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Col4a6B1AVK5 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a6B1AVK5 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.46■□□□□ 0.23
Col4a6B1AVK5 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a6B1AVK5 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Col4a6B1AVK5 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Col4a6B1AVK5 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a6B1AVK5 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Col4a6B1AVK5 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a6B1AVK5 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a6B1AVK5 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a6B1AVK5 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a6B1AVK5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Col4a6B1AVK5 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Col4a6B1AVK5 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.45■□□□□ 0.22
Col4a6B1AVK5 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.45■□□□□ 0.22
Col4a6B1AVK5 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a6B1AVK5 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a6B1AVK5 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.45■□□□□ 0.22
Col4a6B1AVK5 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms