Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Krt28A6BLY7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Krt28A6BLY7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Krt28A6BLY7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Krt28A6BLY7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Krt28A6BLY7 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Krt28A6BLY7 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Krt28A6BLY7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Krt28A6BLY7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Krt28A6BLY7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Krt28A6BLY7 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.83■□□□□ 0.45
Krt28A6BLY7 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Krt28A6BLY7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Krt28A6BLY7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Krt28A6BLY7 Gm8344-201ENSMUST00000119813 856 ntBASIC17.83■□□□□ 0.44
Krt28A6BLY7 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Krt28A6BLY7 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Krt28A6BLY7 Gm44335-201ENSMUST00000196879 141 ntBASIC17.83■□□□□ 0.44
Krt28A6BLY7 Gm44297-201ENSMUST00000198304 141 ntBASIC17.83■□□□□ 0.44
Krt28A6BLY7 Gm44346-201ENSMUST00000198851 141 ntBASIC17.83■□□□□ 0.44
Krt28A6BLY7 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.83■□□□□ 0.44
Krt28A6BLY7 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.83■□□□□ 0.44
Krt28A6BLY7 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Krt28A6BLY7 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Krt28A6BLY7 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Krt28A6BLY7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Krt28A6BLY7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Krt28A6BLY7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Krt28A6BLY7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Krt28A6BLY7 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Krt28A6BLY7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Krt28A6BLY7 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt28A6BLY7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt28A6BLY7 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt28A6BLY7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.82■□□□□ 0.44
Krt28A6BLY7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt28A6BLY7 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt28A6BLY7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Krt28A6BLY7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.82■□□□□ 0.44
Krt28A6BLY7 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Krt28A6BLY7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Krt28A6BLY7 Mir7023-201ENSMUST00000185093 64 ntBASIC17.82■□□□□ 0.44
Krt28A6BLY7 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Krt28A6BLY7 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt28A6BLY7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt28A6BLY7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt28A6BLY7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt28A6BLY7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Krt28A6BLY7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.82■□□□□ 0.44
Krt28A6BLY7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt28A6BLY7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt28A6BLY7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt28A6BLY7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt28A6BLY7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt28A6BLY7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt28A6BLY7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Krt28A6BLY7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt28A6BLY7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt28A6BLY7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.81■□□□□ 0.44
Krt28A6BLY7 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Krt28A6BLY7 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.81■□□□□ 0.44
Krt28A6BLY7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt28A6BLY7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt28A6BLY7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Krt28A6BLY7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Krt28A6BLY7 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.81■□□□□ 0.44
Krt28A6BLY7 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Krt28A6BLY7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt28A6BLY7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt28A6BLY7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt28A6BLY7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt28A6BLY7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt28A6BLY7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt28A6BLY7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt28A6BLY7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Krt28A6BLY7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Krt28A6BLY7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt28A6BLY7 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Krt28A6BLY7 Gm13365-201ENSMUST00000121188 973 ntBASIC17.8■□□□□ 0.44
Krt28A6BLY7 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.8■□□□□ 0.44
Krt28A6BLY7 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Krt28A6BLY7 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.8■□□□□ 0.44
Krt28A6BLY7 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.8■□□□□ 0.44
Krt28A6BLY7 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt28A6BLY7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Krt28A6BLY7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt28A6BLY7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Krt28A6BLY7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt28A6BLY7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt28A6BLY7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt28A6BLY7 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Krt28A6BLY7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt28A6BLY7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt28A6BLY7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krt28A6BLY7 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krt28A6BLY7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krt28A6BLY7 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krt28A6BLY7 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krt28A6BLY7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krt28A6BLY7 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms