Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.85■□□□□ 0.29
Scn1aA2APX8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Scn1aA2APX8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.85■□□□□ 0.29
Scn1aA2APX8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn1aA2APX8 Gm5682-201ENSMUST00000173402 505 ntBASIC16.85■□□□□ 0.29
Scn1aA2APX8 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.85■□□□□ 0.29
Scn1aA2APX8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.85■□□□□ 0.29
Scn1aA2APX8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.85■□□□□ 0.29
Scn1aA2APX8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn1aA2APX8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn1aA2APX8 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.85■□□□□ 0.29
Scn1aA2APX8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.84■□□□□ 0.29
Scn1aA2APX8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scn1aA2APX8 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.84■□□□□ 0.29
Scn1aA2APX8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scn1aA2APX8 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scn1aA2APX8 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scn1aA2APX8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.84■□□□□ 0.29
Scn1aA2APX8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn1aA2APX8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.84■□□□□ 0.29
Scn1aA2APX8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn1aA2APX8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn1aA2APX8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.84■□□□□ 0.29
Scn1aA2APX8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn1aA2APX8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn1aA2APX8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn1aA2APX8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scn1aA2APX8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn1aA2APX8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scn1aA2APX8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn1aA2APX8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn1aA2APX8 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.84■□□□□ 0.29
Scn1aA2APX8 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.84■□□□□ 0.29
Scn1aA2APX8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.84■□□□□ 0.29
Scn1aA2APX8 Gm27646-201ENSMUST00000183989 110 ntBASIC16.84■□□□□ 0.29
Scn1aA2APX8 Gm6550-201ENSMUST00000187574 993 ntBASIC16.84■□□□□ 0.29
Scn1aA2APX8 Gm6089-201ENSMUST00000197666 938 ntBASIC16.84■□□□□ 0.29
Scn1aA2APX8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.84■□□□□ 0.29
Scn1aA2APX8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn1aA2APX8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Scn1aA2APX8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn1aA2APX8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn1aA2APX8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.83■□□□□ 0.29
Scn1aA2APX8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scn1aA2APX8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scn1aA2APX8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scn1aA2APX8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.83■□□□□ 0.29
Scn1aA2APX8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Scn1aA2APX8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scn1aA2APX8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scn1aA2APX8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.83■□□□□ 0.29
Scn1aA2APX8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn1aA2APX8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn1aA2APX8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.83■□□□□ 0.28
Scn1aA2APX8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn1aA2APX8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn1aA2APX8 Mir5131-201ENSMUST00000175426 93 ntBASIC16.83■□□□□ 0.28
Scn1aA2APX8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scn1aA2APX8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Scn1aA2APX8 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.83■□□□□ 0.28
Scn1aA2APX8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.83■□□□□ 0.28
Scn1aA2APX8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn1aA2APX8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn1aA2APX8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn1aA2APX8 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn1aA2APX8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn1aA2APX8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn1aA2APX8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.83■□□□□ 0.28
Scn1aA2APX8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Scn1aA2APX8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn1aA2APX8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.83■□□□□ 0.28
Scn1aA2APX8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn1aA2APX8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Scn1aA2APX8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn1aA2APX8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn1aA2APX8 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn1aA2APX8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scn1aA2APX8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.82■□□□□ 0.28
Scn1aA2APX8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.82■□□□□ 0.28
Scn1aA2APX8 AW822252-206ENSMUST00000208904 237 ntBASIC16.82■□□□□ 0.28
Scn1aA2APX8 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.82■□□□□ 0.28
Scn1aA2APX8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn1aA2APX8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.82■□□□□ 0.28
Scn1aA2APX8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn1aA2APX8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn1aA2APX8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn1aA2APX8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Scn1aA2APX8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Scn1aA2APX8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Scn1aA2APX8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.82■□□□□ 0.28
Scn1aA2APX8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.82■□□□□ 0.28
Scn1aA2APX8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.82■□□□□ 0.28
Scn1aA2APX8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.82■□□□□ 0.28
Scn1aA2APX8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Scn1aA2APX8 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.82■□□□□ 0.28
Scn1aA2APX8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.82■□□□□ 0.28
Scn1aA2APX8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn1aA2APX8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn1aA2APX8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.82■□□□□ 0.28
Scn1aA2APX8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms