Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 AC154649.1-201ENSMUST00000227392 384 ntBASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 Gm18421-201ENSMUST00000204122 625 ntBASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav12d-1A0N8R0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 App-207ENSMUST00000227737 2827 ntBASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav12d-1A0N8R0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav12d-1A0N8R0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms