Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv17A0A140T8P8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv17A0A140T8P8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Gm13216-201ENSMUST00000117145 591 ntBASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Gm37722-201ENSMUST00000193757 208 ntBASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trbv17A0A140T8P8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Gm44450-201ENSMUST00000199528 114 ntBASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv17A0A140T8P8 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms