Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Gm7791-201ENSMUST00000219066 539 ntBASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhgb8A0A140LI48 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 Gm17661-201ENSMUST00000170317 270 ntBASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhgb8A0A140LI48 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhgb8A0A140LI48 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Gm18101-201ENSMUST00000215769 548 ntBASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdhgb8A0A140LI48 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms