Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gm44672-201ENSMUST00000206944 1098 ntBASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9d-4A0A0G2JG37 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav9d-4A0A0G2JG37 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav9d-4A0A0G2JG37 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gm10602-201ENSMUST00000098239 609 ntBASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9d-4A0A0G2JG37 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Alkbh1-212ENSMUST00000185301 408 ntBASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gm37179-201ENSMUST00000194862 823 ntBASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav9d-4A0A0G2JG37 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms