Protein–RNA interactions for Protein: A0A0G2JF94

Trav14-1, T cell receptor alpha variable 14-1 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14-1A0A0G2JF94 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav14-1A0A0G2JF94 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav14-1A0A0G2JF94 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC10.7□□□□□ -0.7
Trav14-1A0A0G2JF94 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav14-1A0A0G2JF94 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav14-1A0A0G2JF94 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC10.7□□□□□ -0.7
Trav14-1A0A0G2JF94 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav14-1A0A0G2JF94 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav14-1A0A0G2JF94 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav14-1A0A0G2JF94 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Gm11539-201ENSMUST00000119837 557 ntBASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Gm22240-201ENSMUST00000175225 82 ntBASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav14-1A0A0G2JF94 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Gm16061-201ENSMUST00000122167 857 ntBASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 AC159205.3-201ENSMUST00000224614 874 ntBASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Zfp264-201ENSMUST00000208656 1563 ntBASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav14-1A0A0G2JF94 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav14-1A0A0G2JF94 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav14-1A0A0G2JF94 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav14-1A0A0G2JF94 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav14-1A0A0G2JF94 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms