Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv19A0A0B4J1H4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv19A0A0B4J1H4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv19A0A0B4J1H4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv19A0A0B4J1H4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv19A0A0B4J1H4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trbv19A0A0B4J1H4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv19A0A0B4J1H4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv19A0A0B4J1H4 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.96□□□□□ -0.33
Trbv19A0A0B4J1H4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Trbv19A0A0B4J1H4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv19A0A0B4J1H4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.96□□□□□ -0.33
Trbv19A0A0B4J1H4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv19A0A0B4J1H4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv19A0A0B4J1H4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.96□□□□□ -0.33
Trbv19A0A0B4J1H4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.96□□□□□ -0.33
Trbv19A0A0B4J1H4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv19A0A0B4J1H4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv19A0A0B4J1H4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.96□□□□□ -0.33
Trbv19A0A0B4J1H4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv19A0A0B4J1H4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv19A0A0B4J1H4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv19A0A0B4J1H4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv19A0A0B4J1H4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.96□□□□□ -0.34
Trbv19A0A0B4J1H4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.96□□□□□ -0.34
Trbv19A0A0B4J1H4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv19A0A0B4J1H4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv19A0A0B4J1H4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trbv19A0A0B4J1H4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Trbv19A0A0B4J1H4 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.96□□□□□ -0.34
Trbv19A0A0B4J1H4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv19A0A0B4J1H4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv19A0A0B4J1H4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv19A0A0B4J1H4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.94□□□□□ -0.34
Trbv19A0A0B4J1H4 Gm27389-201ENSMUST00000183622 195 ntBASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms