Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Asic1-205ENSMUST00000228185 1818 ntBASIC15.31■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Timm23-208ENSMUST00000226683 750 ntBASIC15.31■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Phf7-203ENSMUST00000226565 1971 ntBASIC15.29■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.29■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Gm18115-201ENSMUST00000221209 621 ntBASIC15.29■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sirpb1aA0A0A6YYP6 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms